Gene Svir_32780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_32780 
Symbol 
ID8388602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3558456 
End bp3559106 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content69% 
IMG OID644977305 
Productresponse regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein 
Protein accessionYP_003135075 
Protein GI257057243 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCAAAG TGATGTTCGC CGACGATGAG GAGCTGGTCC GCTCGGGCTT GCGCGCGATG 
GTGTCGCCGG CCTCGGACAT CGAGGTCGTG GGCGAGGCGG CCGACGGGAG AACGGCGGTG
GAGGCGGTGC GCCGGTTCCA TCCCGACGTG GCTCTGCTCG ACATCCGCAT GCGCACGCCC
GACGACGGTA TCCGGGCTCT TCGGGCGATC CAGACGTTGC CGAAGCCGCC GGCGGTGGCC
ATGCTGACGA CGTTCGACAT CGACGAGTAC GTCAGCCTCG CGCTCCGGTT CGGCGCGAAC
GGCTTCCTCC TCAAGGACAT CGAACCCATC ATGCTGGTGC GCGCCATCCG CGACCTCGCG
CGCGGCGGTG CGGTCCTCGA CCCCGGCGTG GCCGCGCGCA TGGTGAACGC CCACCGCGAC
GGGCAACGGG CGTCCGCCCC CGCGCGGGAG CTCCTCGCGT CGCTGTCGGA CCGGGAACGG
GAAGTCGTCA CGCTCATCGG ACAAGGACTG TCCAACGCCG AGATCGGAGG ACGGCTGCAC
CTGTCCGAGG CCACGGTCAA GGGCTACGTC TCGGCGGTGC TGTCCAAGAT CGGTGCGGCG
AACCGGGTGC AGGCCGCCCT ACTCGCCTAT CGGGGTGGGT TGGTCGAATG A
 
Protein sequence
MIKVMFADDE ELVRSGLRAM VSPASDIEVV GEAADGRTAV EAVRRFHPDV ALLDIRMRTP 
DDGIRALRAI QTLPKPPAVA MLTTFDIDEY VSLALRFGAN GFLLKDIEPI MLVRAIRDLA
RGGAVLDPGV AARMVNAHRD GQRASAPARE LLASLSDRER EVVTLIGQGL SNAEIGGRLH
LSEATVKGYV SAVLSKIGAA NRVQAALLAY RGGLVE