More than 300 homologs were found in PanDaTox collection
for query gene Tpau_0647 on replicon NC_014158
Organism: Tsukamurella paurometabola DSM 20162



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014158  Tpau_0647  two component transcriptional regulator, LuxR family  100 
 
 
212 aa  427  1e-119  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.518884  n/a   
 
 
-
 
NC_013235  Namu_4067  two component transcriptional regulator, LuxR family  59.05 
 
 
218 aa  234  5.0000000000000005e-61  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.352272 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  52.34 
 
 
220 aa  201  7e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.36 
 
 
230 aa  200  9.999999999999999e-51  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  51.4 
 
 
239 aa  199  3e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  48.84 
 
 
221 aa  196  3e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  52.56 
 
 
215 aa  195  4.0000000000000005e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  50.7 
 
 
225 aa  195  4.0000000000000005e-49  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  49.77 
 
 
226 aa  194  6e-49  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  50.46 
 
 
226 aa  194  6e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  50.7 
 
 
214 aa  194  1e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.92 
 
 
229 aa  194  1e-48  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  48.64 
 
 
231 aa  192  2e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013521  Sked_16860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.77 
 
 
258 aa  192  4e-48  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.85724  normal  0.036031 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  50.23 
 
 
225 aa  191  1e-47  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  48.84 
 
 
220 aa  191  1e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  48.13 
 
 
221 aa  189  2e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  46.98 
 
 
215 aa  189  2e-47  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  45.97 
 
 
220 aa  190  2e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  46.85 
 
 
225 aa  189  2.9999999999999997e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  49.3 
 
 
221 aa  189  2.9999999999999997e-47  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.39 
 
 
222 aa  188  5e-47  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  48.11 
 
 
218 aa  188  7e-47  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  48.42 
 
 
234 aa  187  8e-47  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  49.07 
 
 
234 aa  187  8e-47  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  47.37 
 
 
213 aa  187  8e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.75 
 
 
236 aa  187  1e-46  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  50 
 
 
211 aa  187  1e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  48.61 
 
 
225 aa  186  2e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3488  response regulator receiver  49.08 
 
 
229 aa  186  2e-46  Nocardioides sp. JS614  Bacteria  normal  0.920048  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  47.32 
 
 
227 aa  186  2e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  49.77 
 
 
230 aa  186  2e-46  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  48.15 
 
 
224 aa  186  3e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  48.17 
 
 
226 aa  185  4e-46  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  47.95 
 
 
230 aa  185  4e-46  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  45.62 
 
 
224 aa  185  4e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  49.08 
 
 
223 aa  185  5e-46  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  48.15 
 
 
225 aa  185  5e-46  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  48.64 
 
 
222 aa  185  5e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  50 
 
 
220 aa  185  6e-46  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  46.98 
 
 
224 aa  184  7e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  47.47 
 
 
224 aa  184  7e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  51.38 
 
 
220 aa  184  8e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  46.43 
 
 
233 aa  184  9e-46  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  48.37 
 
 
222 aa  184  9e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  47.44 
 
 
218 aa  184  1.0000000000000001e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  47.69 
 
 
230 aa  184  1.0000000000000001e-45  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4009  two component transcriptional regulator, LuxR family  46.4 
 
 
231 aa  183  2.0000000000000003e-45  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0669057  normal  0.324745 
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  48.57 
 
 
215 aa  182  2.0000000000000003e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  47.73 
 
 
229 aa  182  2.0000000000000003e-45  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  45.62 
 
 
230 aa  182  3e-45  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.65 
 
 
226 aa  182  3e-45  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  45.66 
 
 
221 aa  181  5.0000000000000004e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  49.07 
 
 
215 aa  181  7e-45  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.91 
 
 
244 aa  181  8.000000000000001e-45  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  45.83 
 
 
222 aa  181  9.000000000000001e-45  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.13 
 
 
225 aa  179  2e-44  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  46.98 
 
 
217 aa  180  2e-44  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  46.33 
 
 
241 aa  179  2e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  48.61 
 
 
221 aa  179  2.9999999999999997e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  47.47 
 
 
219 aa  179  4e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  47.25 
 
 
247 aa  178  4.999999999999999e-44  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  50.23 
 
 
221 aa  178  5.999999999999999e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  48.17 
 
 
225 aa  178  5.999999999999999e-44  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  47.98 
 
 
230 aa  178  5.999999999999999e-44  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  47.25 
 
 
217 aa  177  8e-44  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  49.77 
 
 
225 aa  177  8e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  47.27 
 
 
225 aa  177  8e-44  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013131  Caci_6529  two component transcriptional regulator, LuxR family  47.73 
 
 
224 aa  177  9e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.270807  normal  0.114568 
 
 
-
 
NC_013510  Tcur_1300  two component transcriptional regulator, LuxR family  46.26 
 
 
215 aa  177  9e-44  Thermomonospora curvata DSM 43183  Bacteria  normal  0.145336  n/a   
 
 
-
 
NC_014210  Ndas_2190  two component transcriptional regulator, LuxR family  47.42 
 
 
218 aa  177  1e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000643495  hitchhiker  0.000215707 
 
 
-
 
NC_013947  Snas_5265  two component transcriptional regulator, LuxR family  43.93 
 
 
218 aa  177  1e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  42.15 
 
 
248 aa  177  1e-43  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_013595  Sros_3669  response regulator receiver protein  45.54 
 
 
213 aa  177  1e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  46.51 
 
 
228 aa  176  2e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  48.1 
 
 
217 aa  176  2e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  47.44 
 
 
239 aa  176  2e-43  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  47.66 
 
 
216 aa  177  2e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  45.58 
 
 
226 aa  176  2e-43  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  38.25 
 
 
261 aa  176  3e-43  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  47.03 
 
 
223 aa  176  3e-43  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  44.34 
 
 
223 aa  175  4e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  47.06 
 
 
227 aa  175  4e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  47.42 
 
 
217 aa  174  6e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  46.9 
 
 
242 aa  174  9e-43  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  46.05 
 
 
225 aa  174  9.999999999999999e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_014151  Cfla_0857  two component transcriptional regulator, LuxR family  43.66 
 
 
219 aa  174  9.999999999999999e-43  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0762303  normal 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  45.87 
 
 
226 aa  174  9.999999999999999e-43  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  46.3 
 
 
219 aa  173  9.999999999999999e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  45.37 
 
 
223 aa  174  9.999999999999999e-43  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  45.41 
 
 
228 aa  174  9.999999999999999e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  48.13 
 
 
241 aa  174  9.999999999999999e-43  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  44.04 
 
 
230 aa  173  1.9999999999999998e-42  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  47.47 
 
 
224 aa  173  1.9999999999999998e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  46.54 
 
 
219 aa  172  1.9999999999999998e-42  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_012803  Mlut_21850  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.12 
 
 
222 aa  173  1.9999999999999998e-42  Micrococcus luteus NCTC 2665  Bacteria  normal  0.118113  n/a   
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  44.04 
 
 
225 aa  172  1.9999999999999998e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013530  Xcel_2717  two component transcriptional regulator, LuxR family  43.12 
 
 
223 aa  172  2.9999999999999996e-42  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  43.46 
 
 
250 aa  172  2.9999999999999996e-42  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  44.13 
 
 
218 aa  172  2.9999999999999996e-42  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
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