Gene Tpau_0647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0647 
Symbol 
ID9154783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp665860 
End bp666498 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content66% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003645623 
Protein GI296138380 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.518884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCGCG TGGGGGTGGT CGATGATCAG GCGATGTTCC GCAGCGGGCT GTCGATGCTC 
ATCGACAGTC AGGCCGATAT GGAGAACATC GGCGAGGCCG CAGACGGCGT CGAAGCATGC 
GCACTCGTCC GGGACAAGCG CCCGCAGGTG CTCCTGATGG ACGTGCGGAT GCCGAACATC 
GATGGGATCG AGGCGACGGC CCAGATCATG ACCGAGCCCG ACCCGCCCGC CATCATCATG 
CTCACCACGT TCGATCACGA CGAGGCGGTG GCGCGTGCCA TGGAGGCCGG TGCGGCGGGC 
TTTCTCCTCA AGGAGTCGCA ACCGCAGTTC GTCCTCGCCG CCATCCGCGA TGTCGCGGCG 
GGAAACATGG TGGTCGCCGC CTCCGCGGCT CGGCACTTGT TCGCTCATCC CCGCCCGTCG 
ACCGCACCGC ATCGACCTGT CGAATTCGGC CGCCTGACCG AGCGGGAACA GCAGATCTTC 
GTGCGCGCCG CAGAGGGTCT GTCGAATGCG GAGATCGCCG AGAAGGAGTT CCTCGCGGAG 
ACCACCGTGA AGACCCACGT CTCCCGCGTG CTCACCAAGC TCGGCCTCCG CGACCGCGTT 
CAACTGGTGG TCTACGCACA CCGTCACGGT CTGGTCTGA
 
Protein sequence
MIRVGVVDDQ AMFRSGLSML IDSQADMENI GEAADGVEAC ALVRDKRPQV LLMDVRMPNI 
DGIEATAQIM TEPDPPAIIM LTTFDHDEAV ARAMEAGAAG FLLKESQPQF VLAAIRDVAA 
GNMVVAASAA RHLFAHPRPS TAPHRPVEFG RLTEREQQIF VRAAEGLSNA EIAEKEFLAE 
TTVKTHVSRV LTKLGLRDRV QLVVYAHRHG LV