More than 300 homologs were found in PanDaTox collection
for query gene Tfu_2233 on replicon NC_007333
Organism: Thermobifida fusca YX



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007333  Tfu_2233  LuxR response regulator receiver  100 
 
 
228 aa  442  1e-123  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8799  response regulator receiver protein  76.89 
 
 
227 aa  318  3e-86  Streptosporangium roseum DSM 43021  Bacteria  normal  0.755207  normal 
 
 
-
 
NC_014210  Ndas_4417  two component transcriptional regulator, LuxR family  68.98 
 
 
232 aa  280  2e-74  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1125  two component transcriptional regulator, LuxR family  62.33 
 
 
229 aa  251  6e-66  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.306134 
 
 
-
 
NC_013530  Xcel_0759  two component transcriptional regulator, LuxR family  65.09 
 
 
221 aa  248  7e-65  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.174089  n/a   
 
 
-
 
NC_013739  Cwoe_5656  two component transcriptional regulator, LuxR family  64.49 
 
 
222 aa  245  4.9999999999999997e-64  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_0395  two component LuxR family transcriptional regulator  63.89 
 
 
217 aa  243  1.9999999999999999e-63  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  58.06 
 
 
230 aa  238  4e-62  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013510  Tcur_2469  two component transcriptional regulator, LuxR family  61.09 
 
 
229 aa  238  4e-62  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000889267  n/a   
 
 
-
 
NC_013757  Gobs_1986  two component transcriptional regulator, LuxR family  58.9 
 
 
226 aa  236  2e-61  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1318  response regulator receiver  60.45 
 
 
225 aa  235  5.0000000000000005e-61  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_2024  two component transcriptional regulator, LuxR family  60.85 
 
 
220 aa  232  3e-60  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.876474  normal 
 
 
-
 
NC_013595  Sros_4219  response regulator receiver protein  60 
 
 
217 aa  227  1e-58  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.0092025  hitchhiker  0.000784643 
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  56.28 
 
 
215 aa  226  2e-58  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_009953  Sare_1603  two component LuxR family transcriptional regulator  62.96 
 
 
245 aa  223  2e-57  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0252513 
 
 
-
 
NC_009921  Franean1_2268  two component LuxR family transcriptional regulator  56.36 
 
 
250 aa  219  3e-56  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.00478344  normal  0.0390494 
 
 
-
 
NC_013521  Sked_26900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.79 
 
 
247 aa  217  1e-55  Sanguibacter keddieii DSM 10542  Bacteria  hitchhiker  0.00793239  normal  0.935402 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.8 
 
 
222 aa  215  5.9999999999999996e-55  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_013595  Sros_4672  response regulator receiver protein  54.88 
 
 
212 aa  214  8e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.223352  normal  0.339353 
 
 
-
 
NC_014151  Cfla_0822  two component transcriptional regulator, LuxR family  53.88 
 
 
229 aa  213  9.999999999999999e-55  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_2730  response regulator receiver  52.83 
 
 
216 aa  211  5.999999999999999e-54  Gordonia bronchialis DSM 43247  Bacteria  normal  0.776601  n/a   
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  55.61 
 
 
215 aa  211  5.999999999999999e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_013947  Snas_5068  two component transcriptional regulator, LuxR family  59.63 
 
 
220 aa  206  2e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.708369  normal 
 
 
-
 
NC_013174  Jden_2514  two component transcriptional regulator, LuxR family  49.54 
 
 
230 aa  206  2e-52  Jonesia denitrificans DSM 20603  Bacteria  normal  0.135771  normal  0.887193 
 
 
-
 
NC_014210  Ndas_2780  two component transcriptional regulator, LuxR family  53.46 
 
 
219 aa  206  3e-52  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.855193  normal  0.402473 
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  52.47 
 
 
219 aa  205  4e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2010  two component transcriptional regulator, LuxR family  53.52 
 
 
214 aa  203  2e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2689  two component transcriptional regulator, LuxR family  59.24 
 
 
223 aa  201  6e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.364406  normal  0.346923 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  50 
 
 
226 aa  201  9e-51  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013947  Snas_1960  two component transcriptional regulator, LuxR family  52.31 
 
 
216 aa  200  9.999999999999999e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  52.07 
 
 
223 aa  199  3.9999999999999996e-50  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  47.77 
 
 
231 aa  196  4.0000000000000005e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013093  Amir_3314  two component transcriptional regulator, LuxR family  52.78 
 
 
222 aa  196  4.0000000000000005e-49  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.00833126  n/a   
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  48.61 
 
 
225 aa  195  4.0000000000000005e-49  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  47.71 
 
 
241 aa  195  5.000000000000001e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  47.73 
 
 
224 aa  194  8.000000000000001e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_012669  Bcav_0296  two component transcriptional regulator, LuxR family  56.7 
 
 
198 aa  194  8.000000000000001e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.1736  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  50.23 
 
 
221 aa  193  2e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.16 
 
 
236 aa  192  3e-48  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013595  Sros_3669  response regulator receiver protein  53.52 
 
 
213 aa  192  3e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1883  two component transcriptional regulator, LuxR family  57.28 
 
 
215 aa  192  3e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0780809 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  50 
 
 
215 aa  192  4e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013595  Sros_6161  response regulator receiver protein  51.87 
 
 
221 aa  192  5e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.902987  decreased coverage  0.000109123 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  47.95 
 
 
227 aa  191  8e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  47.73 
 
 
224 aa  191  9e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  46.67 
 
 
233 aa  191  1e-47  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  49.77 
 
 
216 aa  189  2e-47  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013595  Sros_3998  response regulator receiver protein  50.46 
 
 
233 aa  189  2e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.363745  normal  0.263649 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  49.09 
 
 
226 aa  190  2e-47  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  48.39 
 
 
224 aa  190  2e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013093  Amir_0601  two component transcriptional regulator, LuxR family  50.46 
 
 
215 aa  190  2e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_5893  two component transcriptional regulator, LuxR family  48.85 
 
 
218 aa  189  2.9999999999999997e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  46.05 
 
 
220 aa  188  8e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  53.46 
 
 
241 aa  187  9e-47  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.49 
 
 
230 aa  187  9e-47  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  47.06 
 
 
239 aa  187  1e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  48.95 
 
 
239 aa  187  1e-46  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  47.22 
 
 
218 aa  187  1e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  49.54 
 
 
227 aa  187  1e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  47.11 
 
 
234 aa  186  2e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  46.33 
 
 
225 aa  187  2e-46  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  51.63 
 
 
220 aa  186  3e-46  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  44.49 
 
 
221 aa  186  3e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  47.11 
 
 
226 aa  186  3e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013093  Amir_2225  two component transcriptional regulator, LuxR family  52.36 
 
 
209 aa  186  3e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  47.75 
 
 
234 aa  186  4e-46  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013169  Ksed_06250  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.68 
 
 
228 aa  186  4e-46  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  48.61 
 
 
218 aa  185  5e-46  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  50.23 
 
 
222 aa  185  5e-46  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.81 
 
 
229 aa  185  5e-46  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  48.64 
 
 
226 aa  185  6e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  46.54 
 
 
213 aa  185  6e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  53.18 
 
 
225 aa  184  7e-46  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  47.09 
 
 
215 aa  184  1.0000000000000001e-45  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  48.87 
 
 
220 aa  183  2.0000000000000003e-45  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.09 
 
 
226 aa  183  2.0000000000000003e-45  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  48.44 
 
 
229 aa  183  2.0000000000000003e-45  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  51.12 
 
 
222 aa  183  2.0000000000000003e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  49.77 
 
 
221 aa  182  3e-45  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  47.44 
 
 
218 aa  182  3e-45  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  49.1 
 
 
220 aa  182  3e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  50 
 
 
225 aa  182  3e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  46.58 
 
 
225 aa  182  4.0000000000000006e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  47.22 
 
 
221 aa  182  4.0000000000000006e-45  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  40.41 
 
 
248 aa  182  4.0000000000000006e-45  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  49.31 
 
 
225 aa  182  5.0000000000000004e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  48.85 
 
 
226 aa  182  5.0000000000000004e-45  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013739  Cwoe_0366  two component transcriptional regulator, LuxR family  52.78 
 
 
220 aa  181  6e-45  Conexibacter woesei DSM 14684  Bacteria  normal  0.0587069  normal  0.203995 
 
 
-
 
NC_013947  Snas_5262  two component transcriptional regulator, LuxR family  46.33 
 
 
219 aa  181  7e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  47.95 
 
 
225 aa  181  9.000000000000001e-45  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_1616  two component transcriptional regulator, LuxR family  45.7 
 
 
226 aa  181  9.000000000000001e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0231149  normal  0.0629914 
 
 
-
 
NC_014210  Ndas_4254  two component transcriptional regulator, LuxR family  45.79 
 
 
225 aa  180  1e-44  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.867992  normal  0.287586 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  45.09 
 
 
228 aa  180  2e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3676  two component transcriptional regulator, LuxR family  47.89 
 
 
214 aa  180  2e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0625047  normal  0.0780809 
 
 
-
 
NC_013595  Sros_2445  response regulator receiver protein  49.07 
 
 
218 aa  179  2e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0115114  normal  0.02149 
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  48.83 
 
 
213 aa  179  2.9999999999999997e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  44.84 
 
 
228 aa  179  4e-44  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  47.44 
 
 
302 aa  179  4e-44  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  49.78 
 
 
220 aa  179  4.999999999999999e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  44.75 
 
 
223 aa  178  7e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
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