More than 300 homologs were found in PanDaTox collection
for query gene Sros_3998 on replicon NC_013595
Organism: Streptosporangium roseum DSM 43021



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013595  Sros_3998  response regulator receiver protein  100 
 
 
233 aa  453  1.0000000000000001e-126  Streptosporangium roseum DSM 43021  Bacteria  normal  0.363745  normal  0.263649 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  55.96 
 
 
220 aa  211  1e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  54.71 
 
 
229 aa  207  2e-52  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  57.67 
 
 
217 aa  206  3e-52  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  53.05 
 
 
220 aa  204  8e-52  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  56.56 
 
 
221 aa  204  9e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013947  Snas_3676  two component transcriptional regulator, LuxR family  51.43 
 
 
214 aa  203  2e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0625047  normal  0.0780809 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  52.61 
 
 
218 aa  203  2e-51  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  54.5 
 
 
227 aa  202  3e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  55.4 
 
 
225 aa  202  4e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  53.12 
 
 
222 aa  201  7e-51  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  54.3 
 
 
227 aa  200  9.999999999999999e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  51.61 
 
 
239 aa  199  1.9999999999999998e-50  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  52.05 
 
 
225 aa  199  1.9999999999999998e-50  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  54.09 
 
 
241 aa  199  1.9999999999999998e-50  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  52.07 
 
 
224 aa  199  1.9999999999999998e-50  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  52.02 
 
 
226 aa  198  7e-50  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  54.79 
 
 
221 aa  197  1.0000000000000001e-49  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  54.38 
 
 
215 aa  196  2.0000000000000003e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  52.56 
 
 
221 aa  196  2.0000000000000003e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  51.33 
 
 
220 aa  196  2.0000000000000003e-49  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  50.91 
 
 
225 aa  196  3e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  51.16 
 
 
216 aa  195  4.0000000000000005e-49  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  51.16 
 
 
220 aa  195  4.0000000000000005e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  54.09 
 
 
225 aa  195  5.000000000000001e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  50.92 
 
 
241 aa  194  9e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  50 
 
 
247 aa  193  2e-48  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  50.43 
 
 
234 aa  192  3e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  49.55 
 
 
222 aa  192  5e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  52.25 
 
 
225 aa  191  7e-48  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  51.6 
 
 
224 aa  191  8e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  46.81 
 
 
230 aa  191  9e-48  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  51.85 
 
 
230 aa  191  9e-48  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  48.4 
 
 
221 aa  190  1e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  52.04 
 
 
226 aa  191  1e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_009921  Franean1_1652  two component LuxR family transcriptional regulator  57.6 
 
 
217 aa  191  1e-47  Frankia sp. EAN1pec  Bacteria  normal  0.495895  normal  0.106337 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  51.82 
 
 
225 aa  191  1e-47  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  53.88 
 
 
220 aa  190  1e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  53.27 
 
 
217 aa  190  2e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_007333  Tfu_2233  LuxR response regulator receiver  50.46 
 
 
228 aa  189  2e-47  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  51.6 
 
 
224 aa  190  2e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.75 
 
 
226 aa  190  2e-47  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  56.36 
 
 
221 aa  189  2e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  52.04 
 
 
224 aa  190  2e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  51.16 
 
 
225 aa  189  2.9999999999999997e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  54.13 
 
 
222 aa  189  2.9999999999999997e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  51.8 
 
 
230 aa  189  2.9999999999999997e-47  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  50.89 
 
 
221 aa  189  2.9999999999999997e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  49.12 
 
 
227 aa  189  2.9999999999999997e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  50.45 
 
 
226 aa  189  2.9999999999999997e-47  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  52.47 
 
 
230 aa  189  4e-47  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  50 
 
 
223 aa  189  5e-47  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000386408  hitchhiker  0.000570848 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  48.86 
 
 
225 aa  188  7e-47  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  50.23 
 
 
221 aa  187  1e-46  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.32 
 
 
229 aa  187  1e-46  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  48.64 
 
 
225 aa  187  1e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_014210  Ndas_2024  two component transcriptional regulator, LuxR family  51.18 
 
 
220 aa  187  1e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.876474  normal 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  51.52 
 
 
244 aa  187  1e-46  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  46.23 
 
 
210 aa  186  2e-46  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  45.7 
 
 
223 aa  186  2e-46  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0556432 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  53.88 
 
 
225 aa  186  2e-46  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  47.75 
 
 
223 aa  186  2e-46  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  51.16 
 
 
218 aa  187  2e-46  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  47.69 
 
 
226 aa  186  4e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  50 
 
 
213 aa  186  4e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  48.87 
 
 
228 aa  185  4e-46  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  53.46 
 
 
220 aa  185  4e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  49.53 
 
 
224 aa  185  5e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013510  Tcur_2233  two component transcriptional regulator, LuxR family  50.92 
 
 
232 aa  185  5e-46  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00197033  n/a   
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  48 
 
 
226 aa  185  5e-46  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  46.72 
 
 
228 aa  185  5e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6094  two component transcriptional regulator, LuxR family  50.86 
 
 
235 aa  184  7e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.634688  normal  0.121163 
 
 
-
 
NC_013947  Snas_5265  two component transcriptional regulator, LuxR family  50.46 
 
 
218 aa  184  8e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0523  two component transcriptional regulator, LuxR family  50.66 
 
 
230 aa  184  9e-46  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  50.71 
 
 
219 aa  184  1.0000000000000001e-45  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  46.4 
 
 
222 aa  184  1.0000000000000001e-45  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  51.61 
 
 
215 aa  184  1.0000000000000001e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013235  Namu_0651  two component transcriptional regulator, LuxR family  50 
 
 
241 aa  184  1.0000000000000001e-45  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  51.74 
 
 
302 aa  184  1.0000000000000001e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  49.54 
 
 
228 aa  184  1.0000000000000001e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  49.33 
 
 
226 aa  184  1.0000000000000001e-45  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  49.15 
 
 
234 aa  183  2.0000000000000003e-45  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  50.9 
 
 
226 aa  183  2.0000000000000003e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  49.3 
 
 
214 aa  183  2.0000000000000003e-45  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  49.12 
 
 
232 aa  183  2.0000000000000003e-45  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  49.3 
 
 
225 aa  183  2.0000000000000003e-45  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_013093  Amir_3004  two component transcriptional regulator, LuxR family  52.04 
 
 
223 aa  182  3e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0522265  n/a   
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  47.71 
 
 
223 aa  183  3e-45  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_012669  Bcav_0404  two component transcriptional regulator, LuxR family  53.59 
 
 
218 aa  182  3e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0987348  normal 
 
 
-
 
NC_014151  Cfla_0857  two component transcriptional regulator, LuxR family  52.11 
 
 
219 aa  181  9.000000000000001e-45  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0762303  normal 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  47.53 
 
 
223 aa  181  1e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_009380  Strop_4132  response regulator receiver  46.51 
 
 
235 aa  180  1e-44  Salinispora tropica CNB-440  Bacteria  normal  0.232221  normal 
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  45.28 
 
 
216 aa  181  1e-44  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  48.39 
 
 
218 aa  180  1e-44  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013739  Cwoe_0676  two component transcriptional regulator, LuxR family  52.63 
 
 
215 aa  181  1e-44  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2225  two component transcriptional regulator, LuxR family  54.63 
 
 
209 aa  180  2e-44  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  46.75 
 
 
231 aa  180  2e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_013093  Amir_5893  two component transcriptional regulator, LuxR family  47.73 
 
 
218 aa  180  2e-44  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  49.77 
 
 
219 aa  180  2e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013131  Caci_6705  two component transcriptional regulator, LuxR family  45.49 
 
 
258 aa  179  2.9999999999999997e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.318103  normal  0.0731204 
 
 
-
 
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