Gene Tfu_2233 details

Gene Information

• Locus tag: Tfu_2233
• ID: 3580902
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: +
• Start bp: 2630085
• End bp: 2630771
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 637685941
• Product: LuxR response regulator receiver
• Protein accession: YP_290289
• Protein GI: 72162632
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCCAGC CTGCCGATCC GCCGATCACT GTGCTGCTCG TCGACGATGA TCCGCTCGTG 
CGCGCCGGCT TGACCATAAT GCTGGGTGGG GCACCGGACC TGCGGGTGGT GGGGGACGCG 
GGCGACGGCG CCCAAGCGCT CGCCCTCGTC GACGAGCACC ACCCGGACGT GGTGCTCATG 
GACATCCGCA TGCCGGGCAT GGACGGGCTG ACCGCGACCG AGCGGCTGCG TGCCCGGCGC 
AACGCCCCCG AAGTGATCGT GCTCACCACG TTCGACGCCG ATCAGCACGT CCTGCGTGCG 
CTGCGTGCCG GGGCCGCCGG CTTCCTGGTG AAGGACACTC CGCCCGAAGA GATCGTGGCG 
GCGGTGCGGC AGGTGGCCTG CGGCAACCCG GTCCTGTCCC CGACCGTCCT GCGCAGGCTC 
ATCGCGCGGG TCGCCGACCC TGAGGCAGAC CTGCGGCGGA GCCGTGCCCG GCAGCGGCTC 
GCCCACCTCA ACGACCGGGA GCGCGAGGTG GCGGTAGCGG TGGGCCGCGG CCTGTCCAAC 
GCGCAGATCA GCGCGGCCCT GCATCTGAGC GTGCCGACGG TGAAAACGCA CGTCTCCGCC 
ATTCTGGCCA AGTTCGGTTT CACCAACCGG GTCCAGATCG CCCTGCTGGT GCATGACGCG 
GGCCTTCTCG ACGACGCGAC GCCCTGA 

 

Protein sequence

MTQPADPPIT VLLVDDDPLV RAGLTIMLGG APDLRVVGDA GDGAQALALV DEHHPDVVLM 
DIRMPGMDGL TATERLRARR NAPEVIVLTT FDADQHVLRA LRAGAAGFLV KDTPPEEIVA 
AVRQVACGNP VLSPTVLRRL IARVADPEAD LRRSRARQRL AHLNDREREV AVAVGRGLSN 
AQISAALHLS VPTVKTHVSA ILAKFGFTNR VQIALLVHDA GLLDDATP