| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2656 |
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| Symbol | |
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| ID | 8334005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 3043008 |
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| End bp | 3043688 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644955807 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003113413 |
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| Protein GI | 256391849 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.161573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGCGCCC TGCGCGTGCT GATCGTCGAC GACGACGACC TGATGCGGGC CGGGCTGTGC
GCGGTGCTGT CCAGCGACAC GACGATCGAG GTGGTCGCCG AGGCCGCCGA CGGACACGCC
GCGGTCCAGG CCGCGGCGCG GGTCCTGCCC GACGTCATCC TGATGGACGT GCGCATGCCG
GTCCTGGACG GCATCGCCGC GACCCGGCAG ATCGTCGCCG CCTGGCCGCG CGCCCGCGTC
CTCATCCTGA CCACCTTCGA GGACGACGAC TACGTCTACG GCGCCCTCGC CGCCGGCGCC
TCCGGCTTCC TGCTCAAGCG CACCCGCCCC GAGCACCTGA TCGCCGCGAT CCACACCATC
GCCGGCGGCG AGGCGCTCCT GTCCCCCGCC GTCACCCGAA CCGTCATCGA CCGGATGATC
GAGCAGCCCG CCCGCGACCC CCGCACGATG CGCCGACTCA GTGCTCTGAC ACCTCGCGAG
CGCGACGTCC TGGAACTGGT GGCGCGCGGA CTGTCCAACC CCGAGATCGC GCAGACACTC
GTCGTCAGCG AGTCGACCGT CAAGACCCAC ATGAAGCGCA TCCTGGACAA GCTCGACCTG
CGCGACCGCG TCCAAGCGGT CATCTTGGCC TACGAAGCCG GAGTCACACG GCCTGGAAGC
GCCAAGCCGG TCAGGGAGTG A
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| Protein sequence | MSALRVLIVD DDDLMRAGLC AVLSSDTTIE VVAEAADGHA AVQAAARVLP DVILMDVRMP
VLDGIAATRQ IVAAWPRARV LILTTFEDDD YVYGALAAGA SGFLLKRTRP EHLIAAIHTI
AGGEALLSPA VTRTVIDRMI EQPARDPRTM RRLSALTPRE RDVLELVARG LSNPEIAQTL
VVSESTVKTH MKRILDKLDL RDRVQAVILA YEAGVTRPGS AKPVRE
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