More than 300 homologs were found in PanDaTox collection
for query gene Bcav_0404 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012669  Bcav_0404  two component transcriptional regulator, LuxR family  100 
 
 		 218 aa  419  1e-116  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0987348  normal  1 
 
 
-
 
NC_013739  Cwoe_0676  two component transcriptional regulator, LuxR family  93.93 
 
 		 215 aa  387  1e-106  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_0609  response regulator receiver protein  71.43 
 
 		 218 aa  312  1.9999999999999998e-84  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_3846  two component LuxR family transcriptional regulator  73.83 
 
 		 249 aa  298  3e-80  Frankia sp. EAN1pec  Bacteria  normal  0.525033  normal  0.770826 
 
 
-
 
NC_013235  Namu_0544  two component transcriptional regulator, LuxR family  69.77 
 
 		 215 aa  294  5e-79  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_3639  two component transcriptional regulator, LuxR family  69.77 
 
 		 215 aa  292  3e-78  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.274763  normal  1 
 
 
-
 
NC_013159  Svir_39200  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  62.98 
 
 		 218 aa  253  1.0000000000000001e-66  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.254077 
 
 
-
 
NC_013510  Tcur_1300  two component transcriptional regulator, LuxR family  61.75 
 
 		 215 aa  251  8.000000000000001e-66  Thermomonospora curvata DSM 43183  Bacteria  normal  0.145336  n/a   
 
 
-
 
NC_013947  Snas_0607  two component transcriptional regulator, LuxR family  62.44 
 
 		 216 aa  249  2e-65  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009664  Krad_2518  two component transcriptional regulator, LuxR family  61.79 
 
 		 225 aa  247  8e-65  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_7377  response regulator receiver protein  65.09 
 
 		 216 aa  244  8e-64  Streptosporangium roseum DSM 43021  Bacteria  normal  0.92051  normal  1 
 
 
-
 
NC_014211  Ndas_4872  two component transcriptional regulator, LuxR family  62.98 
 
 		 232 aa  239  2e-62  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.247388  normal  1 
 
 
-
 
NC_013093  Amir_3004  two component transcriptional regulator, LuxR family  59.72 
 
 		 223 aa  239  2.9999999999999997e-62  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0522265  n/a   
 
 
-
 
NC_013947  Snas_5550  two component transcriptional regulator, LuxR family  58.22 
 
 		 213 aa  236  2e-61  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.159917  normal  0.0692801 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  58.96 
 
 		 226 aa  234  5.0000000000000005e-61  Conexibacter woesei DSM 14684  Bacteria  normal  1  hitchhiker  0.00432991 
 
 
-
 
NC_013595  Sros_8800  response regulator receiver protein  58.88 
 
 		 215 aa  232  3e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  0.752334  normal  1 
 
 
-
 
NC_013521  Sked_21600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  56.94 
 
 		 222 aa  228  7e-59  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.49613  normal  1 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  57.35 
 
 		 234 aa  224  5.0000000000000005e-58  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  55.41 
 
 		 225 aa  221  4.9999999999999996e-57  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013093  Amir_4001  two component transcriptional regulator, LuxR family  58.29 
 
 		 217 aa  219  3e-56  Actinosynnema mirum DSM 43827  Bacteria  normal  0.380782  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  55.96 
 
 		 226 aa  219  3e-56  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  56.4 
 
 		 225 aa  218  5e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.137578 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  55.5 
 
 		 227 aa  218  7.999999999999999e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013530  Xcel_2717  two component transcriptional regulator, LuxR family  53.7 
 
 		 223 aa  217  1e-55  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  52.51 
 
 		 228 aa  214  8e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal  1 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  53.08 
 
 		 239 aa  213  1.9999999999999998e-54  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  53.59 
 
 		 219 aa  212  2.9999999999999995e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal  1 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  56.42 
 
 		 226 aa  212  3.9999999999999995e-54  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal  1 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  55.71 
 
 		 221 aa  212  3.9999999999999995e-54  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal  1 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  55.98 
 
 		 219 aa  211  4.9999999999999996e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal  1 
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  52.34 
 
 		 225 aa  210  1e-53  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  hitchhiker  0.000789071 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  54.03 
 
 		 219 aa  209  3e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  55.45 
 
 		 229 aa  209  4e-53  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  55.02 
 
 		 219 aa  208  4e-53  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  57.48 
 
 		 220 aa  208  4e-53  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  54.88 
 
 		 216 aa  208  6e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  53.08 
 
 		 213 aa  208  6e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  55.76 
 
 		 225 aa  207  8e-53  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013595  Sros_6306  response regulator receiver protein  53.02 
 
 		 209 aa  207  1e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0259699  normal  0.0492304 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  55.81 
 
 		 227 aa  207  1e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  50.91 
 
 		 228 aa  206  2e-52  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  52.53 
 
 		 217 aa  206  2e-52  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  52.56 
 
 		 221 aa  206  3e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  53.3 
 
 		 217 aa  205  3e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  53.3 
 
 		 222 aa  206  3e-52  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  53.59 
 
 		 220 aa  204  6e-52  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal  1 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  52.53 
 
 		 218 aa  204  7e-52  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  55.5 
 
 		 220 aa  204  7e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal  1 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  51.39 
 
 		 218 aa  204  8e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013235  Namu_0651  two component transcriptional regulator, LuxR family  54.46 
 
 		 241 aa  202  2e-51  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  51.64 
 
 		 225 aa  202  2e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  44.86 
 
 		 248 aa  203  2e-51  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  52.8 
 
 		 226 aa  202  2e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52 
 
 		 244 aa  202  3e-51  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  53.33 
 
 		 216 aa  202  4e-51  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  49.55 
 
 		 220 aa  201  6e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  52.23 
 
 		 223 aa  201  6e-51  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  52.61 
 
 		 247 aa  201  8e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal  1 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  49.32 
 
 		 225 aa  200  9.999999999999999e-51  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  52.51 
 
 		 239 aa  200  9.999999999999999e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  51.85 
 
 		 231 aa  201  9.999999999999999e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal  1 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  50.92 
 
 		 224 aa  199  1.9999999999999998e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  50.7 
 
 		 224 aa  199  1.9999999999999998e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  51.89 
 
 		 218 aa  199  3e-50  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  52.56 
 
 		 225 aa  198  3.9999999999999996e-50  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  51.12 
 
 		 242 aa  198  5e-50  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  53 
 
 		 220 aa  198  6e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.495874 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  51.16 
 
 		 215 aa  197  7.999999999999999e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  53.52 
 
 		 221 aa  197  1.0000000000000001e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal  1 
 
 
-
 
NC_013093  Amir_2010  two component transcriptional regulator, LuxR family  51.39 
 
 		 214 aa  197  1.0000000000000001e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  39.84 
 
 		 261 aa  196  2.0000000000000003e-49  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  52.09 
 
 		 220 aa  196  2.0000000000000003e-49  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  48.37 
 
 		 224 aa  196  3e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal  1 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  49.29 
 
 		 221 aa  196  3e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  50.23 
 
 		 241 aa  196  3e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  52.36 
 
 		 215 aa  195  4.0000000000000005e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  52.68 
 
 		 211 aa  195  4.0000000000000005e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  52.78 
 
 		 241 aa  195  5.000000000000001e-49  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  49.14 
 
 		 231 aa  195  6e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.176081 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  51.82 
 
 		 221 aa  194  7e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal  1 
 
 
-
 
NC_014158  Tpau_1009  two component transcriptional regulator, LuxR family  57.49 
 
 		 214 aa  194  7e-49  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.849645  n/a   
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.34 
 
 		 222 aa  194  1e-48  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  55.35 
 
 		 224 aa  194  1e-48  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  48.84 
 
 		 224 aa  194  1e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal  1 
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  51.29 
 
 		 239 aa  194  1e-48  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  48.58 
 
 		 228 aa  192  2e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014151  Cfla_0857  two component transcriptional regulator, LuxR family  50.7 
 
 		 219 aa  192  2e-48  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0762303  normal  1 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  53.74 
 
 		 222 aa  193  2e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  50 
 
 		 230 aa  192  4e-48  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  51.17 
 
 		 221 aa  192  4e-48  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  47.27 
 
 		 221 aa  192  4e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal  1 
 
 
-
 
NC_013093  Amir_2225  two component transcriptional regulator, LuxR family  53.85 
 
 		 209 aa  192  4e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50 
 
 		 236 aa  191  5e-48  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  48.66 
 
 		 233 aa  191  5e-48  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  51.6 
 
 		 230 aa  191  6e-48  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.0025253 
 
 
-
 
NC_013093  Amir_4511  two component transcriptional regulator, LuxR family  51.15 
 
 		 226 aa  191  6e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  0.11054  n/a   
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.33 
 
 		 226 aa  191  7e-48  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  50 
 
 		 222 aa  191  9e-48  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal  1 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  47.42 
 
 		 261 aa  191  1e-47  Cryptobacterium curtum DSM 15641  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_3219  two component transcriptional regulator, LuxR family  54.21 
 
 		 208 aa  191  1e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
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