Gene Tpau_1009 details

Gene Information

• Locus tag: Tpau_1009
• ID: 9155149
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 1033843
• End bp: 1034487
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 73%
• Product: two component transcriptional regulator, LuxR family
• Protein accession: YP_003645981
• Protein GI: 296138738

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.849645
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCGATCA GAGTGGTACT CGCGGACGAC CAGGAGATGG TCCGGATGGG GTTCGCGATG 
ATCCTGGGCG GCGCCGCGGA CATCGAGGTG GTGGGGCAGG CGGCCGACGG GGTGGAGGCG 
ATCTCGGTGA TCGCGCGCTG TAGACCCGAT GTGGCGCTGC TCGACATCCG GATGCCACAG 
CTCGAGGGTA TCGAGGTGTG CCGGCGGGTC GCGGGGACCG GCGTCCGCGC GGTGATGGTC 
ACGACGTTCG GTGAACCGGA CTACGTCGAC GACTCGCTCG CGGCCGGGGC TTCGGGGTTC 
TTGCTCAAGG ATGCCGGCCC CGATCTGCTG CTCGCCGCCG TGCGCGCCGC CGCCGAGGGC 
GACGCGCTGA TCAGTCCGGA GCTCACCGTG GACCTGCTGG CCCGGAACCG GCGCGCCGGA 
TCCCGGGAGC CGGCCGCGGC CGGGGCGATC GCGGAACTCA CCCCGCGCGA ACGGGAGGTG 
GCCGCGTGCG TGGCGCGGGG CCGGACCAAC GCGGAGATCG CGGACGAGCT GGTGATCAGC 
CTGGGCACGG TGAAGACGCA CCTGAGTGCG ATCGGGCAGC GGCTGGGCGC GCGCAACCGG 
GTGGAGATCG CCGCGGCCAT GTGGGCCGCG GGCGCGATGG ACTGA 

 

Protein sequence

MPIRVVLADD QEMVRMGFAM ILGGAADIEV VGQAADGVEA ISVIARCRPD VALLDIRMPQ 
LEGIEVCRRV AGTGVRAVMV TTFGEPDYVD DSLAAGASGF LLKDAGPDLL LAAVRAAAEG 
DALISPELTV DLLARNRRAG SREPAAAGAI AELTPREREV AACVARGRTN AEIADELVIS 
LGTVKTHLSA IGQRLGARNR VEIAAAMWAA GAMD