More than 300 homologs were found in PanDaTox collection
for query gene Svir_39200 on replicon NC_013159
Organism: Saccharomonospora viridis DSM 43017



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013159  Svir_39200  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  100 
 
 
218 aa  431  1e-120  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.254077 
 
 
-
 
NC_014211  Ndas_4872  two component transcriptional regulator, LuxR family  73.46 
 
 
232 aa  306  1.0000000000000001e-82  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.247388  normal 
 
 
-
 
NC_013510  Tcur_1300  two component transcriptional regulator, LuxR family  71.83 
 
 
215 aa  296  1e-79  Thermomonospora curvata DSM 43183  Bacteria  normal  0.145336  n/a   
 
 
-
 
NC_009664  Krad_2518  two component transcriptional regulator, LuxR family  69.95 
 
 
225 aa  281  7.000000000000001e-75  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7377  response regulator receiver protein  70.42 
 
 
216 aa  280  9e-75  Streptosporangium roseum DSM 43021  Bacteria  normal  0.92051  normal 
 
 
-
 
NC_013947  Snas_5550  two component transcriptional regulator, LuxR family  66.2 
 
 
213 aa  273  2.0000000000000002e-72  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.159917  normal  0.0692801 
 
 
-
 
NC_013947  Snas_0607  two component transcriptional regulator, LuxR family  61.75 
 
 
216 aa  265  5e-70  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_3219  two component transcriptional regulator, LuxR family  68.57 
 
 
208 aa  263  1e-69  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_3004  two component transcriptional regulator, LuxR family  61.75 
 
 
223 aa  263  2e-69  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0522265  n/a   
 
 
-
 
NC_013093  Amir_4001  two component transcriptional regulator, LuxR family  63.08 
 
 
217 aa  255  4e-67  Actinosynnema mirum DSM 43827  Bacteria  normal  0.380782  n/a   
 
 
-
 
NC_012669  Bcav_0404  two component transcriptional regulator, LuxR family  62.98 
 
 
218 aa  253  1.0000000000000001e-66  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0987348  normal 
 
 
-
 
NC_013947  Snas_3639  two component transcriptional regulator, LuxR family  60.19 
 
 
215 aa  250  9.000000000000001e-66  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.274763  normal 
 
 
-
 
NC_009921  Franean1_3846  two component LuxR family transcriptional regulator  62.33 
 
 
249 aa  248  4e-65  Frankia sp. EAN1pec  Bacteria  normal  0.525033  normal  0.770826 
 
 
-
 
NC_013595  Sros_0609  response regulator receiver protein  60.29 
 
 
218 aa  247  9e-65  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0676  two component transcriptional regulator, LuxR family  61.54 
 
 
215 aa  245  4e-64  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_6306  response regulator receiver protein  61.43 
 
 
209 aa  243  1.9999999999999999e-63  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0259699  normal  0.0492304 
 
 
-
 
NC_013235  Namu_0544  two component transcriptional regulator, LuxR family  59.24 
 
 
215 aa  243  1.9999999999999999e-63  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8800  response regulator receiver protein  59.72 
 
 
215 aa  241  5e-63  Streptosporangium roseum DSM 43021  Bacteria  normal  0.752334  normal 
 
 
-
 
NC_013947  Snas_1734  two component transcriptional regulator, LuxR family  61.08 
 
 
188 aa  221  6e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.34281  normal 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  52.58 
 
 
219 aa  218  5e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  51.61 
 
 
225 aa  218  5e-56  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000789071 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  53.49 
 
 
222 aa  218  6e-56  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  51.87 
 
 
234 aa  218  7e-56  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  51.4 
 
 
219 aa  214  5.9999999999999996e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  53.52 
 
 
218 aa  212  3.9999999999999995e-54  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013521  Sked_21600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.61 
 
 
222 aa  211  7.999999999999999e-54  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.49613  normal 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  49.08 
 
 
228 aa  211  7.999999999999999e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  52.05 
 
 
225 aa  210  1e-53  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  51.6 
 
 
224 aa  209  2e-53  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  50.47 
 
 
225 aa  209  2e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  52.56 
 
 
221 aa  209  2e-53  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  49.77 
 
 
224 aa  209  2e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  50.93 
 
 
219 aa  208  6e-53  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  51.38 
 
 
221 aa  207  1e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  50.47 
 
 
239 aa  204  6e-52  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  49.53 
 
 
220 aa  203  2e-51  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  50.95 
 
 
211 aa  202  2e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2717  two component transcriptional regulator, LuxR family  48.62 
 
 
223 aa  202  3e-51  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  50.45 
 
 
227 aa  202  3e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  50.23 
 
 
223 aa  202  3e-51  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  50 
 
 
226 aa  202  4e-51  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  51.14 
 
 
226 aa  201  6e-51  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  50 
 
 
227 aa  201  6e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  51.15 
 
 
215 aa  201  8e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_012669  Bcav_3891  two component transcriptional regulator, LuxR family  51.15 
 
 
221 aa  200  9.999999999999999e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  50 
 
 
219 aa  199  1.9999999999999998e-50  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  47.91 
 
 
225 aa  198  5e-50  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.77 
 
 
244 aa  198  5e-50  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  49.08 
 
 
226 aa  198  5e-50  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  47.96 
 
 
226 aa  197  7.999999999999999e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  50.47 
 
 
216 aa  197  9e-50  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  49.77 
 
 
218 aa  197  9e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  50.23 
 
 
221 aa  196  3e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  50 
 
 
219 aa  196  3e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  49.55 
 
 
225 aa  195  3e-49  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  50 
 
 
220 aa  196  3e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  50.69 
 
 
220 aa  194  9e-49  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  48.84 
 
 
225 aa  194  9e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  51.15 
 
 
222 aa  194  1e-48  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  42.98 
 
 
248 aa  193  2e-48  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_014158  Tpau_1009  two component transcriptional regulator, LuxR family  57.77 
 
 
214 aa  193  2e-48  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.849645  n/a   
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  49.32 
 
 
223 aa  192  3e-48  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  45.13 
 
 
242 aa  192  3e-48  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  45.21 
 
 
230 aa  192  3e-48  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  46.33 
 
 
247 aa  192  3e-48  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  50.7 
 
 
218 aa  192  3e-48  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  48.88 
 
 
222 aa  192  4e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  45.83 
 
 
221 aa  192  4e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  46.48 
 
 
220 aa  192  4e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  48.43 
 
 
229 aa  191  5e-48  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  42.68 
 
 
250 aa  191  5e-48  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  46.3 
 
 
215 aa  191  5e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  48.58 
 
 
220 aa  191  5e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  51.21 
 
 
213 aa  190  1e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0651  two component transcriptional regulator, LuxR family  48.89 
 
 
241 aa  190  1e-47  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  49.08 
 
 
241 aa  189  2e-47  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  45.91 
 
 
228 aa  189  2e-47  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  47.22 
 
 
224 aa  190  2e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  45.83 
 
 
261 aa  189  4e-47  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  47.66 
 
 
217 aa  188  5e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  44.7 
 
 
228 aa  188  5e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  37.45 
 
 
261 aa  188  5e-47  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  50.91 
 
 
225 aa  188  5.999999999999999e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.79 
 
 
222 aa  187  8e-47  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  49.1 
 
 
225 aa  187  1e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.08 
 
 
225 aa  186  2e-46  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  46.26 
 
 
220 aa  187  2e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  48.23 
 
 
249 aa  186  3e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  45.29 
 
 
230 aa  186  3e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  50 
 
 
220 aa  185  4e-46  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  47.25 
 
 
225 aa  185  4e-46  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  47.75 
 
 
227 aa  184  7e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  51.85 
 
 
221 aa  184  1.0000000000000001e-45  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  46.85 
 
 
230 aa  184  1.0000000000000001e-45  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  47 
 
 
224 aa  184  1.0000000000000001e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  45.12 
 
 
221 aa  184  1.0000000000000001e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.09 
 
 
226 aa  184  1.0000000000000001e-45  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  47.73 
 
 
234 aa  183  2.0000000000000003e-45  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  46.15 
 
 
221 aa  183  2.0000000000000003e-45  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  47.93 
 
 
220 aa  183  2.0000000000000003e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
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