| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3004 |
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| Symbol | |
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| ID | 8327194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 3470839 |
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| End bp | 3471510 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644943530 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003100770 |
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| Protein GI | 256377110 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0522265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATCC GGGTGCTGAT CGCCGACGAC CAGGAGATGA TGCGCTCGGC GTACGGGATG
ATCCTGGGCG CTCAGCCGGA CATGGAGGTC GTGGGGAGCG TCGGGGACGG CGAGGCGGCG
GTGTCGGAGG CGCGGAGGTT GCGGCCGGAC GTGTGCCTGC TCGACATCCG GATGCCTCGG
GTGGACGGGC TGGAGGCGAC CCGGCTGCTC GCCGGGCCTG GGGTGCGGGA CCCGCTGAAC
GTGCTGATCG CGACCACGTT CGACCTGGAC GAGTACGTGT ACCGGGCGCT GCGGCACGGG
GCGTGCGGGT TCCTGCTGAA GGACATGTCG CCCGCGCTGC TGGTGGAGGC GGTGCGGGCG
GCGGCGGCCG GGACGTCGAT GATCTCGCCG AACGTGACCG TGCGGCTGCT GGCGCACCTG
GCGCCCGAGC GGGGCGCGGA GCGGGCCGAG GAGTCGGCCG CGCTGGTGGA GCCGCTGACC
GAGCGGGAGC TGGAGGTGGT CCGGCTGGTG GCGCTGGGGC GGACCAACGA CGAGGTGGCC
GGGGAGCTGC ACCTCGGGGT GGCGACGGTG AAGACGCACC TGGGGAACGC GCAGCGCAAG
CTGGCGGCGC GCAACCGGGT CGAGGTGGCG GCGTGGGCCT GGCGGACGGG GCTGGTGCCG
GGGCGGGGGT GA
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| Protein sequence | MSIRVLIADD QEMMRSAYGM ILGAQPDMEV VGSVGDGEAA VSEARRLRPD VCLLDIRMPR
VDGLEATRLL AGPGVRDPLN VLIATTFDLD EYVYRALRHG ACGFLLKDMS PALLVEAVRA
AAAGTSMISP NVTVRLLAHL APERGAERAE ESAALVEPLT ERELEVVRLV ALGRTNDEVA
GELHLGVATV KTHLGNAQRK LAARNRVEVA AWAWRTGLVP GRG
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