More than 300 homologs were found in PanDaTox collection
for query gene Snas_0607 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_0607  two component transcriptional regulator, LuxR family  100 
 
 
216 aa  422  1e-117  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8800  response regulator receiver protein  71.16 
 
 
215 aa  288  4e-77  Streptosporangium roseum DSM 43021  Bacteria  normal  0.752334  normal 
 
 
-
 
NC_013510  Tcur_1300  two component transcriptional regulator, LuxR family  65.89 
 
 
215 aa  283  1.0000000000000001e-75  Thermomonospora curvata DSM 43183  Bacteria  normal  0.145336  n/a   
 
 
-
 
NC_013595  Sros_7377  response regulator receiver protein  68.84 
 
 
216 aa  278  4e-74  Streptosporangium roseum DSM 43021  Bacteria  normal  0.92051  normal 
 
 
-
 
NC_009664  Krad_2518  two component transcriptional regulator, LuxR family  66.82 
 
 
225 aa  271  8.000000000000001e-72  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5550  two component transcriptional regulator, LuxR family  61.5 
 
 
213 aa  270  1e-71  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.159917  normal  0.0692801 
 
 
-
 
NC_013159  Svir_39200  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  61.75 
 
 
218 aa  265  5e-70  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.254077 
 
 
-
 
NC_014211  Ndas_4872  two component transcriptional regulator, LuxR family  62.98 
 
 
232 aa  263  2e-69  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.247388  normal 
 
 
-
 
NC_013093  Amir_3004  two component transcriptional regulator, LuxR family  59.91 
 
 
223 aa  258  5.0000000000000005e-68  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0522265  n/a   
 
 
-
 
NC_009921  Franean1_3846  two component LuxR family transcriptional regulator  62.21 
 
 
249 aa  257  1e-67  Frankia sp. EAN1pec  Bacteria  normal  0.525033  normal  0.770826 
 
 
-
 
NC_013595  Sros_0609  response regulator receiver protein  61.79 
 
 
218 aa  256  2e-67  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0404  two component transcriptional regulator, LuxR family  62.44 
 
 
218 aa  249  2e-65  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0987348  normal 
 
 
-
 
NC_013739  Cwoe_0676  two component transcriptional regulator, LuxR family  61.03 
 
 
215 aa  245  4e-64  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3639  two component transcriptional regulator, LuxR family  57.94 
 
 
215 aa  244  4.9999999999999997e-64  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.274763  normal 
 
 
-
 
NC_013235  Namu_0544  two component transcriptional regulator, LuxR family  58.29 
 
 
215 aa  241  7.999999999999999e-63  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  56.6 
 
 
226 aa  231  7.000000000000001e-60  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013093  Amir_4001  two component transcriptional regulator, LuxR family  55.56 
 
 
217 aa  221  4e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  0.380782  n/a   
 
 
-
 
NC_013595  Sros_6306  response regulator receiver protein  56.67 
 
 
209 aa  221  8e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0259699  normal  0.0492304 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  52.34 
 
 
234 aa  213  1.9999999999999998e-54  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  51.9 
 
 
225 aa  207  7e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  51.79 
 
 
229 aa  206  2e-52  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  50.47 
 
 
222 aa  205  5e-52  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1734  two component transcriptional regulator, LuxR family  58.2 
 
 
188 aa  204  6e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.34281  normal 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  51.9 
 
 
219 aa  204  8e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  52.51 
 
 
247 aa  202  4e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  52.8 
 
 
225 aa  201  6e-51  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  50.23 
 
 
219 aa  201  6e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  53.02 
 
 
220 aa  201  7e-51  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  47.25 
 
 
225 aa  201  9e-51  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000789071 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  52.04 
 
 
226 aa  201  9.999999999999999e-51  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  51.16 
 
 
220 aa  200  1.9999999999999998e-50  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013521  Sked_21600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.54 
 
 
222 aa  199  1.9999999999999998e-50  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.49613  normal 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  53.21 
 
 
224 aa  199  3e-50  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  52.78 
 
 
218 aa  198  5e-50  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  51.87 
 
 
219 aa  198  5e-50  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  50.47 
 
 
219 aa  197  7e-50  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  50.93 
 
 
228 aa  196  3e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  49.33 
 
 
234 aa  195  5.000000000000001e-49  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013093  Amir_3219  two component transcriptional regulator, LuxR family  53.52 
 
 
208 aa  194  6e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  49.77 
 
 
220 aa  195  6e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  47.69 
 
 
220 aa  194  7e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  48.13 
 
 
224 aa  194  8.000000000000001e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  49.77 
 
 
226 aa  194  1e-48  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  50.93 
 
 
216 aa  193  1e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  49.55 
 
 
227 aa  193  2e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.33 
 
 
244 aa  193  2e-48  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  49.3 
 
 
221 aa  193  2e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  47.87 
 
 
217 aa  193  2e-48  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013530  Xcel_2717  two component transcriptional regulator, LuxR family  47 
 
 
223 aa  192  3e-48  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  49.05 
 
 
211 aa  191  7e-48  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  48.23 
 
 
242 aa  191  7e-48  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  48.85 
 
 
221 aa  191  8e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  50.46 
 
 
220 aa  191  9e-48  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  47.71 
 
 
226 aa  190  1e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  47.49 
 
 
239 aa  190  1e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  50.24 
 
 
218 aa  189  2.9999999999999997e-47  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  46.98 
 
 
215 aa  189  4e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  51.18 
 
 
213 aa  188  4e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3891  two component transcriptional regulator, LuxR family  50.47 
 
 
221 aa  187  8e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  50.92 
 
 
225 aa  186  2e-46  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013510  Tcur_2233  two component transcriptional regulator, LuxR family  50.7 
 
 
232 aa  186  2e-46  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00197033  n/a   
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  47.93 
 
 
241 aa  186  2e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  49.3 
 
 
228 aa  186  3e-46  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  51.6 
 
 
225 aa  185  4e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  46.3 
 
 
224 aa  185  4e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  46.92 
 
 
225 aa  185  5e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013235  Namu_0651  two component transcriptional regulator, LuxR family  48.9 
 
 
241 aa  185  5e-46  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  47.56 
 
 
228 aa  185  6e-46  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2710  two component transcriptional regulator, LuxR family  48.87 
 
 
230 aa  184  6e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.248821  normal  0.606697 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  42.56 
 
 
248 aa  184  1.0000000000000001e-45  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  46.51 
 
 
218 aa  182  4.0000000000000006e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  52.36 
 
 
225 aa  182  4.0000000000000006e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  46.75 
 
 
244 aa  182  4.0000000000000006e-45  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  47.71 
 
 
227 aa  182  4.0000000000000006e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  50 
 
 
222 aa  182  4.0000000000000006e-45  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_007333  Tfu_1403  LuxR response regulator receiver  48.36 
 
 
214 aa  182  5.0000000000000004e-45  Thermobifida fusca YX  Bacteria  normal  0.676683  n/a   
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  47.03 
 
 
220 aa  181  6e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  50 
 
 
241 aa  181  6e-45  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  45.91 
 
 
225 aa  181  6e-45  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.3 
 
 
222 aa  181  7e-45  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  48.11 
 
 
217 aa  181  7e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  47.95 
 
 
224 aa  180  1e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  45.79 
 
 
239 aa  180  1e-44  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  48.58 
 
 
215 aa  180  2e-44  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  48.85 
 
 
221 aa  179  2.9999999999999997e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  46.85 
 
 
230 aa  178  4.999999999999999e-44  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  45.41 
 
 
261 aa  178  7e-44  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  46.33 
 
 
222 aa  178  7e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  46.33 
 
 
230 aa  177  8e-44  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  45.75 
 
 
223 aa  177  9e-44  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  45.33 
 
 
221 aa  177  1e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  45.37 
 
 
225 aa  177  1e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  48.15 
 
 
225 aa  177  1e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  45.66 
 
 
230 aa  177  2e-43  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  47.89 
 
 
221 aa  176  2e-43  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  46.79 
 
 
224 aa  176  2e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  47.3 
 
 
222 aa  176  2e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013595  Sros_5499  response regulator receiver protein  46.41 
 
 
213 aa  176  3e-43  Streptosporangium roseum DSM 43021  Bacteria  decreased coverage  0.00659712  normal  0.108677 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  48.4 
 
 
223 aa  176  3e-43  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013595  Sros_6211  response regulator receiver protein  48.17 
 
 
239 aa  176  3e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.377169 
 
 
-
 
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