Gene Tfu_1845 details

Gene Information

• Locus tag: Tfu_1845
• ID: 3579428
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: -
• Start bp: 2152087
• End bp: 2152734
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637685537
• Product: LuxR response regulator receiver
• Protein accession: YP_289901
• Protein GI: 72162244
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.00433344
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCTCGG TTCTCGTGGT CGACGACGAG CAACTGGTAC GTTCCGGACT GCGGATGATC 
CTGGAGTCCG CGCCTGACCT GGAGGTCGTG GGGGAGGCCG CGGACGGTGC CGAGGCCGTG 
GCCTTGGCGC GGAAGTTGCA GCCCGATGTG GTGCTGCTGG ACATCCGCAT GCCGGGCATG 
GACGGGCTGA CCGCTGCCGC GCATCTCGCG GAACTCCCCA ACGCGCCCAA AGTGGTGCTG 
CTCACCACGT TCGACTTGGA CGAGTACGTG CACCGCGGGT TGCGGGCCAA AGCCGTGGGG 
TTCCTGCTCA AGGACACTCC GCCGCGGGAC CTGATCACTG CGGTGCGCAC CGTGTACGAG 
GGTAACGCGA TGCTCGCGCC CAGTGTCACC AAGCGCATGC TGGAGCGGTT CGCGGCTCCT 
AGCGGGAACA GTGCCGCGGA GGCGGCCCGG CGGTTGGAAG TGTTGAGCGA ACGGGAGCGC 
GCAGTGCTGG TCGGTGTGGC CCGCGGGTTG TCCAACGCGG AGATCGCGGC AGAGCTCGGC 
ATGCGCGAGG CCACGGTCAA AGCCCATGTC AGCCGTATTC TGACCAAGCT GGAGAAGAAC 
AACCGGGTGC AGATCGCGAT TCTCGCCCAC GACGCCGGGC TGGTGTGA 

 

Protein sequence

MISVLVVDDE QLVRSGLRMI LESAPDLEVV GEAADGAEAV ALARKLQPDV VLLDIRMPGM 
DGLTAAAHLA ELPNAPKVVL LTTFDLDEYV HRGLRAKAVG FLLKDTPPRD LITAVRTVYE 
GNAMLAPSVT KRMLERFAAP SGNSAAEAAR RLEVLSERER AVLVGVARGL SNAEIAAELG 
MREATVKAHV SRILTKLEKN NRVQIAILAH DAGLV