| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1403 |
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| Symbol | |
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| ID | 3581030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1626986 |
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| End bp | 1627630 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637685100 |
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| Product | LuxR response regulator receiver |
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| Protein accession | YP_289464 |
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| Protein GI | 72161807 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.676683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGTCAGGG TCGTGGTGGC TGAAGACCAG GCGGCAGTGC GCGCCGGGCT GGTGATGATC
TTGGAGACCG ATCCCGGCAT CACGGTGGTG GCCGAGGCAG CCGACGGGCA GGAAGCGGTG
GACACGTGTC TGCGGCTGCG GCCTGACGTG GCGCTCATGG ATGTGCGCAT GCCGCGGCGG
GACGGGATTT CCGCCACCCA GGAGCTTGCC GCGGCCGGGA TCGATGTGCT GGTGTTGACC
ACTTTCGACT TGGACGAGTA CGTGTTCGGG GCGCTGCGGG CGGGGGCCGC GGGTTTTCTG
CTGAAAGACG TGGAGGCTGC GGACCTGCTG AAAGCGGTGC ACACGGTGGC GCGGGGAGAG
GGCATGATCG CGCCCGCGGT GACTCGACGG CTCATCAACG AGTTCGCCGC CACCCGGCCG
CGGGAGCAGG AGAAAGCAGA CCCCGCCATC CTGGAGCGGC TCACCCCCCG GGAGCGCGAA
GTGCTGGCCT GTATCGGGGA AGGGCTGTCG AACCAGCAGA TCGCGCGGCG CCTCTACATT
ACCGAGACCA CGGCGAAAAC CCACGTCAGC CGGATTCTGA CCAAGCTGGA CCTGCGTAGC
CGGGTCCAGG CGGCCATTGT CGCCCGGGAG GTCGGCTTGG GCTGA
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| Protein sequence | MVRVVVAEDQ AAVRAGLVMI LETDPGITVV AEAADGQEAV DTCLRLRPDV ALMDVRMPRR
DGISATQELA AAGIDVLVLT TFDLDEYVFG ALRAGAAGFL LKDVEAADLL KAVHTVARGE
GMIAPAVTRR LINEFAATRP REQEKADPAI LERLTPRERE VLACIGEGLS NQQIARRLYI
TETTAKTHVS RILTKLDLRS RVQAAIVARE VGLG
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