| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_0278 |
|---|
| Symbol | |
|---|
| ID | 9144144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | + |
|---|
| Start bp | 320182 |
|---|
| End bp | 320859 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | two component transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_003635396 |
|---|
| Protein GI | 296128146 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.000789071 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGG GGACCGTGCG CGTCGTCGTC GCCGACGACC AGCCGCTCGT GCGTGCCGGG
CTGTCGACCG TCATCGACAC CGAGCCCGGG CTGGAGGTCG TGGGGCAGGC GGGCGACGGC
GCCACGGCCG TCGCGCTCGC GCACGAGCTG CGGCCCGACG TGGTGTGCAT GGACATCCGC
ATGCCCGGCA CCGACGGCAT CACCGCGACC CGCGCGCTGT GCGGCCCGGA CGTCACCGAC
CCCATCCCGG TGCTGGTGCT CACGACGTTC GACGTCGACG AGTACCTGTT CGGCGCGCTG
GAGGCCGGCG CCTCGGGGTT CCTGCTCAAG GACGCCGAGC CCGCGACCCT CGTCGAGGCC
GTGCGCTCGG TGGCCGCCGG GCACGGCATG CTCGCCAACG CCCTGACGCG CCGCGTGCTG
CGGGAGGTCG TGACGCGCCG CCGCACCCAG CCCGTCACGG CGGCGCGTGC GAGCGAGCTG
CTGACGCCGC GCGAGCTCGA CATCCTGCTG CTGCTCGCGC AGGGCATGTC CAACGAGGAG
ATCGCGCGCG AGCTGTACCT CGAGGTGTCG ACCGTGAAGT CCCACCTGGC GCGGGCGATG
CCGAAGCTCG GCGTGAGGTC GCGGCTGCAG GCCGTGGTGT GGGCGTACCA GAACGGGATC
GTCGACGTGC CGCGCTGA
|
|---|
| Protein sequence | MTQGTVRVVV ADDQPLVRAG LSTVIDTEPG LEVVGQAGDG ATAVALAHEL RPDVVCMDIR
MPGTDGITAT RALCGPDVTD PIPVLVLTTF DVDEYLFGAL EAGASGFLLK DAEPATLVEA
VRSVAAGHGM LANALTRRVL REVVTRRRTQ PVTAARASEL LTPRELDILL LLAQGMSNEE
IARELYLEVS TVKSHLARAM PKLGVRSRLQ AVVWAYQNGI VDVPR
|
|---|
| |