Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1903 |
Symbol | |
ID | 8883095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 2019709 |
End bp | 2020386 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003510692 |
Protein GI | 291299414 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.202425 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.182857 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAC CCATCCGCGT CCTGGTCGCC GACGACCACC TCGTGGTGCG CACCGGCTTC GCCGAACTGC TTGGCACCCA ACCGGACTTC AGCGTCGTCG GCATCGCCTC CGACGGCGCC GAGGCCGTGA TGGCCTGCCG CACCGCCACC CCCGACGTCG TCCTCATGGA CGTCCGGATG CCCAACATGG ACGGCATCGA GGCCACCCGC CGCATCGCCG CCACCTCCGA GGCGACGCCG CGCGTCATCA TCCTGACCAC TTTCGACCTG GACGAGTACG TCTACGACGC GCTGCGAGCC GGGGCCAGCG GCTTCCTGCT CAAGGACGTC ACCGCCGAGC GGCTGTTCGA CGCCGTACGG GTCGTGGCGG CGGGGGAGGC GCTGCTGGCG CCCACCGTCA CCCGCCGCCT CATCGGCGAG TTCGTCCAGT CCAAGCAGCC GCGCCCGGTC GCCGACGCGA GGCTGGCGTC GCTGACGCCG CGCGAGACCG AGGTGCTGCG GCTGGTCGCC GAAGGACTGT CCAATCCGGA ACTGGCCGCC CGGCTGACCG TCTCGGAGGA GACGGTTAAG ACCCACGTCA GCCGGGTACT GCACAAACTC GGGCTGCGCG ACCGCACCCA GGCGGTGGTG GCCGCCTACG AATCCGGCCT CGTCGTCCCC GGCGGCCGTC CGGCCTAG
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Protein sequence | MSQPIRVLVA DDHLVVRTGF AELLGTQPDF SVVGIASDGA EAVMACRTAT PDVVLMDVRM PNMDGIEATR RIAATSEATP RVIILTTFDL DEYVYDALRA GASGFLLKDV TAERLFDAVR VVAAGEALLA PTVTRRLIGE FVQSKQPRPV ADARLASLTP RETEVLRLVA EGLSNPELAA RLTVSEETVK THVSRVLHKL GLRDRTQAVV AAYESGLVVP GGRPA
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