Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_0645 |
Symbol | |
ID | 8881829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 678880 |
End bp | 679542 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003509451 |
Protein GI | 291298173 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.691779 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGGG TGCTGCTGGC CGACGACCAG GTCCTGATGC GCGGCGGCTT CCGAGCCCTT TTGGACGCCG AGGACGACAT CAGCGTCGTG GCGGAGGCGG CCAACGGCGA GGAGGCGGTT TCGCTTGCGG CCGAACACGT CCCGGACGTG GCGCTCATCG ACATCCAGAT GCCGGGGACC GGTGGCATCG AGGCGGCTCG CCGCATCGCG GCCCGACCGG AGCTGGCGTC GGTGCGGGTG GTCATGCTGA CCAACTACGG CTTCGACGAG TACGTGTACA ACGCGCTGCG CGCCGGGGCG TCGGGGTTCC TGGTCAAGGA CATCGAACCG GCGGAGCTGC TGCACGCGGT GCGGCAGGCG GCTCGCGGGG ATGCTCCACT GTCGCCGGAC GTGGCCCGGA GGTTGATGCG GGACTTCGCT TCCCGGCCGC TGTCACCGAA TCCGGTGGAC GACGAGCGGC TGACGAATCG GGAGCGGGAG GTCGTGGTGC TGGCGGCACA GGGGCTGAAC AACGAGGAGA TCGCGGAGCG GTTGGTGATC AGCCCGACGA CGGCGAAGAC GCATATCAGC CGGGCGATGA TCAAGCTGGC CTGCCGGGAT CGGACGCAGC TGGTGGTCTA CGCGTATGAG TCGGGGTTGA TCACTCCCAA GCAGGCGTCG TGA
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Protein sequence | MIRVLLADDQ VLMRGGFRAL LDAEDDISVV AEAANGEEAV SLAAEHVPDV ALIDIQMPGT GGIEAARRIA ARPELASVRV VMLTNYGFDE YVYNALRAGA SGFLVKDIEP AELLHAVRQA ARGDAPLSPD VARRLMRDFA SRPLSPNPVD DERLTNRERE VVVLAAQGLN NEEIAERLVI SPTTAKTHIS RAMIKLACRD RTQLVVYAYE SGLITPKQAS
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