| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_11600 |
|---|
| Symbol | |
|---|
| ID | 8399708 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | + |
|---|
| Start bp | 1312563 |
|---|
| End bp | 1313240 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644997231 |
|---|
| Product | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| Protein accession | YP_003154596 |
|---|
| Protein GI | 257068341 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00120804 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGACTC CCCCCGCTGC TGTGCGCGTG CTGATCGTCG ACGACCAGTC GATGATCCGC
GGCGGGTTCG AGGCGCTGCT GGGCGCGCAG GAGGGGATCG AGGTGGTGGG CACCGCCGCC
GACGGCGCCG GGATCGTCGA CGTCGTGGCG CGCACCCGCC CGGACGTGGT GCTGATGGAC
ATCCGGATGC CGCACGTGGG CGGGCTCGAG GCGACCCGCG AGGTGCTCGA GATGCCCGGC
GCCGTGCCGA GGATCATCAT GCTCACCACC TTCGATGCGG ACGAGTACGT CTTCGCGGCT
CTGCGGGCCG GGGCGAGCGG GTTCCTGCTC AAGGATTCCA CACCCGAGGA GCTGGTCCAT
GCCGTGCGTG TCGTCGCGGA CGGGCAGTCG CTCCTGGCGC CCCCTGTGAC CCGAGCCCTG
ATCGCGGATT TCGTCGCGCG GCCCGAGCGG TCGGCCGGAG CGGATGCGAG CCTCGCCGTG
CTCACCGAGC GGGAGCTGGA GGTGCTGCGC GGGGTCGCGC GGGGGCTCGC GAACCGGGAG
ATCGCCGCCG AGCTGGTGAT GGCCGAGCAG ACAGTGAAGA CGCACGTCTC GCGCATCCTC
GGCAAGCTGA TGCTGCGCGA CCGCACCCAG CTGGTGGTCG CCGCCTACGA ATCAGGCCTG
GTCATCCCGG GGGAGTGA
|
|---|
| Protein sequence | METPPAAVRV LIVDDQSMIR GGFEALLGAQ EGIEVVGTAA DGAGIVDVVA RTRPDVVLMD
IRMPHVGGLE ATREVLEMPG AVPRIIMLTT FDADEYVFAA LRAGASGFLL KDSTPEELVH
AVRVVADGQS LLAPPVTRAL IADFVARPER SAGADASLAV LTERELEVLR GVARGLANRE
IAAELVMAEQ TVKTHVSRIL GKLMLRDRTQ LVVAAYESGL VIPGE
|
|---|
| |