| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4258 |
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| Symbol | |
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| ID | 5211243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5341463 |
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| End bp | 5342113 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640597847 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001278551 |
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| Protein GI | 148658346 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGCAGT CGGACATATC CATCCTGATC GTCGAAGATC AGACCCTCAT GCGCCAGGGC
TTGAGGACCA TTCTTGATCT TGAAGAAAGC ATCCGTGTGG TCGGAGAAGC GAGGGACGGC
GCAGAAGGGG TGCGAGAGGC GCTCCGGTTA CGGCCCGACA TCATCCTGAT GGATGTGCAG
ATGCCGGTCA TGAACGGTGT GGAGGCCATA CGCGCGATTA TTGCCGCGTG GTCTCAGGCG
CGCATCATTG TGCTGACCAC CTTCGACCGT GATGATTATG TGTTTCAGAG CGTCCGCGCC
GGTGCGATGG GCTACCTGCT CAAAGATGCC CCAGCTGAAG CGCTCCTGCA GACGATCCGG
CGCGTTCACG CCGGTGAGGT CTTCATCCAG CCAGAGATCG CCTCGCGCAC CCTGCGCGAA
GCGGCAACCG GCAGACGGCG CGCCGGGACC ATACCTTTCG ACCTGTCGGA GCGCGAACGC
GAGGTGCTGG TGTTGCTGGC GCAAGGGTTG AGCAACCGCG AGATTGCCGG GCGTCTCTCC
ATCACCGAGG GCACGGTCAA GAACCACGTC TCGAATATTC TTGCCAAACT CCAGGCAGAG
AACCGCACGC AAGCCGCCAA CATTGCCCGC CGGGAAGGGT TGACGGATTA G
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| Protein sequence | MQQSDISILI VEDQTLMRQG LRTILDLEES IRVVGEARDG AEGVREALRL RPDIILMDVQ
MPVMNGVEAI RAIIAAWSQA RIIVLTTFDR DDYVFQSVRA GAMGYLLKDA PAEALLQTIR
RVHAGEVFIQ PEIASRTLRE AATGRRRAGT IPFDLSERER EVLVLLAQGL SNREIAGRLS
ITEGTVKNHV SNILAKLQAE NRTQAANIAR REGLTD
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