More than 300 homologs were found in PanDaTox collection
for query gene Ndas_2024 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_2024  two component transcriptional regulator, LuxR family  100 
 
 
220 aa  426  1e-118  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.876474  normal 
 
 
-
 
NC_013595  Sros_4219  response regulator receiver protein  79.72 
 
 
217 aa  319  1.9999999999999998e-86  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.0092025  hitchhiker  0.000784643 
 
 
-
 
NC_013739  Cwoe_5656  two component transcriptional regulator, LuxR family  66.82 
 
 
222 aa  249  2e-65  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2469  two component transcriptional regulator, LuxR family  63.43 
 
 
229 aa  238  4e-62  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000889267  n/a   
 
 
-
 
NC_009921  Franean1_2268  two component LuxR family transcriptional regulator  60.34 
 
 
250 aa  238  6.999999999999999e-62  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.00478344  normal  0.0390494 
 
 
-
 
NC_007333  Tfu_2233  LuxR response regulator receiver  60.85 
 
 
228 aa  232  3e-60  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8799  response regulator receiver protein  61.21 
 
 
227 aa  230  1e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.755207  normal 
 
 
-
 
NC_014210  Ndas_4417  two component transcriptional regulator, LuxR family  57.01 
 
 
232 aa  229  2e-59  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_0395  two component LuxR family transcriptional regulator  62.62 
 
 
217 aa  229  3e-59  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1125  two component transcriptional regulator, LuxR family  59.56 
 
 
229 aa  225  5.0000000000000005e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.306134 
 
 
-
 
NC_008699  Noca_1318  response regulator receiver  56 
 
 
225 aa  219  1.9999999999999999e-56  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_1986  two component transcriptional regulator, LuxR family  53.57 
 
 
226 aa  217  1e-55  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1603  two component LuxR family transcriptional regulator  62.15 
 
 
245 aa  216  2e-55  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0252513 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  54.38 
 
 
230 aa  212  4.9999999999999996e-54  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.17 
 
 
222 aa  209  3e-53  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  54.46 
 
 
219 aa  206  2e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_2514  two component transcriptional regulator, LuxR family  51.4 
 
 
230 aa  206  2e-52  Jonesia denitrificans DSM 20603  Bacteria  normal  0.135771  normal  0.887193 
 
 
-
 
NC_012669  Bcav_0296  two component transcriptional regulator, LuxR family  59.9 
 
 
198 aa  205  5e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.1736  normal 
 
 
-
 
NC_013947  Snas_5068  two component transcriptional regulator, LuxR family  56.82 
 
 
220 aa  204  9e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.708369  normal 
 
 
-
 
NC_014210  Ndas_2780  two component transcriptional regulator, LuxR family  56.42 
 
 
219 aa  202  2e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.855193  normal  0.402473 
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  56.13 
 
 
215 aa  202  3e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  54.72 
 
 
220 aa  202  3e-51  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013521  Sked_26900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.83 
 
 
247 aa  202  5e-51  Sanguibacter keddieii DSM 10542  Bacteria  hitchhiker  0.00793239  normal  0.935402 
 
 
-
 
NC_013530  Xcel_0759  two component transcriptional regulator, LuxR family  56.19 
 
 
221 aa  201  7e-51  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.174089  n/a   
 
 
-
 
NC_013441  Gbro_2730  response regulator receiver  52.34 
 
 
216 aa  199  1.9999999999999998e-50  Gordonia bronchialis DSM 43247  Bacteria  normal  0.776601  n/a   
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  54.72 
 
 
215 aa  198  5e-50  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_014151  Cfla_0822  two component transcriptional regulator, LuxR family  54.46 
 
 
229 aa  197  1.0000000000000001e-49  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  53.77 
 
 
224 aa  197  1.0000000000000001e-49  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013093  Amir_2010  two component transcriptional regulator, LuxR family  52.13 
 
 
214 aa  197  1.0000000000000001e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_3314  two component transcriptional regulator, LuxR family  53.18 
 
 
222 aa  196  2.0000000000000003e-49  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.00833126  n/a   
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  54.03 
 
 
220 aa  192  4e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  51.18 
 
 
220 aa  190  1e-47  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  50.47 
 
 
220 aa  189  2e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  51.64 
 
 
226 aa  190  2e-47  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013739  Cwoe_0366  two component transcriptional regulator, LuxR family  54.72 
 
 
220 aa  189  2.9999999999999997e-47  Conexibacter woesei DSM 14684  Bacteria  normal  0.0587069  normal  0.203995 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  49.29 
 
 
218 aa  189  2.9999999999999997e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  52.31 
 
 
226 aa  188  5.999999999999999e-47  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  47.27 
 
 
225 aa  187  9e-47  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  49.77 
 
 
223 aa  187  9e-47  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013595  Sros_3998  response regulator receiver protein  51.18 
 
 
233 aa  187  1e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.363745  normal  0.263649 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  52.07 
 
 
227 aa  186  2e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  50.7 
 
 
225 aa  186  2e-46  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013595  Sros_4672  response regulator receiver protein  49.29 
 
 
212 aa  185  5e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.223352  normal  0.339353 
 
 
-
 
NC_012669  Bcav_2689  two component transcriptional regulator, LuxR family  55.19 
 
 
223 aa  184  9e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.364406  normal  0.346923 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.46 
 
 
230 aa  183  2.0000000000000003e-45  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  49.06 
 
 
239 aa  182  3e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1883  two component transcriptional regulator, LuxR family  56.94 
 
 
215 aa  181  6e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0780809 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  50 
 
 
241 aa  181  7e-45  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  49.52 
 
 
213 aa  180  1e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  49.07 
 
 
230 aa  180  1e-44  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  48.18 
 
 
225 aa  181  1e-44  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  47.39 
 
 
221 aa  180  2e-44  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  50.46 
 
 
225 aa  180  2e-44  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  49.54 
 
 
230 aa  180  2e-44  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013595  Sros_3669  response regulator receiver protein  53.08 
 
 
213 aa  179  2e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3714  two component transcriptional regulator, LuxR family  52.36 
 
 
225 aa  179  2.9999999999999997e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.176655 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  48.65 
 
 
228 aa  178  4e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  46.02 
 
 
231 aa  179  4e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  47.37 
 
 
213 aa  178  4.999999999999999e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  50.92 
 
 
229 aa  178  5.999999999999999e-44  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  48.83 
 
 
221 aa  178  5.999999999999999e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  48.36 
 
 
247 aa  178  5.999999999999999e-44  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013093  Amir_2225  two component transcriptional regulator, LuxR family  52.61 
 
 
209 aa  178  7e-44  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  46.92 
 
 
215 aa  177  9e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  48.15 
 
 
225 aa  177  1e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  50 
 
 
221 aa  177  1e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  50.23 
 
 
225 aa  177  1e-43  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.08 
 
 
226 aa  176  2e-43  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  48.39 
 
 
226 aa  176  2e-43  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013235  Namu_0544  two component transcriptional regulator, LuxR family  49.06 
 
 
215 aa  176  3e-43  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  48.86 
 
 
223 aa  176  3e-43  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013595  Sros_6161  response regulator receiver protein  47.87 
 
 
221 aa  176  3e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.902987  decreased coverage  0.000109123 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  48.34 
 
 
228 aa  176  3e-43  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  47.42 
 
 
221 aa  175  4e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  47.42 
 
 
226 aa  175  5e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.6 
 
 
225 aa  175  5e-43  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_012669  Bcav_2710  two component transcriptional regulator, LuxR family  51.38 
 
 
230 aa  175  5e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.248821  normal  0.606697 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  48.11 
 
 
214 aa  174  7e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  48.85 
 
 
225 aa  174  9e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013947  Snas_1960  two component transcriptional regulator, LuxR family  47.39 
 
 
216 aa  174  9e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3639  two component transcriptional regulator, LuxR family  48.83 
 
 
215 aa  174  9.999999999999999e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.274763  normal 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  49.29 
 
 
217 aa  173  1.9999999999999998e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  49.06 
 
 
218 aa  173  1.9999999999999998e-42  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013093  Amir_2811  two component transcriptional regulator, LuxR family  53.93 
 
 
217 aa  173  1.9999999999999998e-42  Actinosynnema mirum DSM 43827  Bacteria  normal  0.206772  n/a   
 
 
-
 
NC_007333  Tfu_1403  LuxR response regulator receiver  48.36 
 
 
214 aa  172  2.9999999999999996e-42  Thermobifida fusca YX  Bacteria  normal  0.676683  n/a   
 
 
-
 
NC_013235  Namu_0523  two component transcriptional regulator, LuxR family  50.71 
 
 
230 aa  172  2.9999999999999996e-42  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  48.83 
 
 
234 aa  172  2.9999999999999996e-42  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  45.87 
 
 
223 aa  172  2.9999999999999996e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  46.33 
 
 
228 aa  172  2.9999999999999996e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  48.65 
 
 
224 aa  172  2.9999999999999996e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  49.53 
 
 
217 aa  172  2.9999999999999996e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  47.95 
 
 
234 aa  172  3.9999999999999995e-42  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  47.87 
 
 
226 aa  172  3.9999999999999995e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  48.61 
 
 
222 aa  171  5.999999999999999e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013093  Amir_0601  two component transcriptional regulator, LuxR family  47.87 
 
 
215 aa  171  5.999999999999999e-42  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  45.66 
 
 
227 aa  171  6.999999999999999e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  44.95 
 
 
224 aa  171  1e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  47.09 
 
 
228 aa  170  1e-41  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  48.84 
 
 
234 aa  170  1e-41  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_013521  Sked_25620  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.54 
 
 
219 aa  170  1e-41  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.263807 
 
 
-
 
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