| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1142 |
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| Symbol | |
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| ID | 5538608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1479694 |
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| End bp | 1480362 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640893274 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001431257 |
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| Protein GI | 156741128 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.661777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGGG TGTTGCTGGT CGATGATCAG ACCCTGATTC GCCAGGGAAT CGCCATGCTG
CTGGAACTCG AGCCGGACCT GGAGGTTGTC GGCGCCGTCG GCGATGGGCG CGCCGCCATT
GAGGCAGTCG AGCGATTGCA CCCCGATGTC GTGCTGATGG ACGTTCGCAT GCCGGGGATG
GATGGCGTCA CTGCCACGCG CGAGTTGCGC CGGCGATTCC CCGATGTTGG CGTCATTATT
CTGACGACTT TCGATGACGA TGAGTATGTG TTCGAGGGGT TGAAAGCCGG TGCGCGCGGC
TATCTGCTGA AGGACATCAG CAGCGAGGAG ATGGCGGAAG CGGTGCGCAC GGTTGCGCGC
GGCGAAGCGC TTATTCAGCC GAGCATTGCG CGCAAAGTCG TGGCGGAGTT CTTGCGCCTG
GCGGTTAGCG CACCGGCGGC GCCGGAGCGT ATGACGCCAA AATCGCCGAA TGCGCTCACC
GAGCGCGAAC TCGATGTGTT GAAAGCCCTG GCGCGCGGCA TGTCGAACAA AGAGATCGCT
GCGGCGCTCG TCATTACCGA AGGCACGGTC AAGACGCATA TCTCGAATAT TCTGGCGAAA
CTCGATGTGC GTGATCGGAC GCAAGCCGTG TTGAAGGCGC AGCAATTGCG GTTGTTGGAA
GAGGGTTAG
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| Protein sequence | MIRVLLVDDQ TLIRQGIAML LELEPDLEVV GAVGDGRAAI EAVERLHPDV VLMDVRMPGM
DGVTATRELR RRFPDVGVII LTTFDDDEYV FEGLKAGARG YLLKDISSEE MAEAVRTVAR
GEALIQPSIA RKVVAEFLRL AVSAPAAPER MTPKSPNALT ERELDVLKAL ARGMSNKEIA
AALVITEGTV KTHISNILAK LDVRDRTQAV LKAQQLRLLE EG
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