| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3185 |
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| Symbol | |
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| ID | 5671561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 3752140 |
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| End bp | 3752811 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641242079 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001507499 |
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| Protein GI | 158314991 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.704721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCCGCG TCCTCCTGGC CGATGACCAG GCCCTGCTGC GCATGGGTCT GCGCATCGTC
ATTGACACCG AAGACGACCT CACCGTCATC GGGGAGGCCA GCGACGGAGC GGAGGCCGTC
CGCGCGGTCG CCGAGCTACA ACCCGACGTC GTCCTCATGG ATGTCCGCAT GCCCGGGGTC
GACGGCATCA CCGCCACCGC GCAGATCACC GCCCGGCACC CGGCCAGCAG GGTGCTGATC
CTGACCACCT TCGACGTCGA TCAGTACGTC TTCGACGGTC TGCGCGCCGG TGCCAGCGGC
TTCCTGCTCA AGGACGCCGC CCCGGGGGAG CTCGTCAACG CCATCCGCAC CGTCGCCCGG
GGCGATGCCG TACTCGGGCC CACCGCGGCA CGGCGTCTCG TCGATCGTTT CGCCGCGCTG
CCAGCCGACA GCGGATCAGA CCGCGCGGCC CGTCCCGAGA TCGTCCACGA TCTCACCGAA
CGGGAGCGTG AGGTGTTCCT GCTTGTCGCC CGCGGGTACT CGAACCGCGA GATCGCCGGC
AGACTCCACC TCTCCGAACA CACTGTAAAG GTCCACGTCG GCCGAATTCT GGCCAAACTC
GACCTACGCG ACCGCATCCA AGCCGTGGTT CTCGCCTACG AATCCGGGCT GGTTATTCCA
GAAATCGATT GA
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| Protein sequence | MIRVLLADDQ ALLRMGLRIV IDTEDDLTVI GEASDGAEAV RAVAELQPDV VLMDVRMPGV
DGITATAQIT ARHPASRVLI LTTFDVDQYV FDGLRAGASG FLLKDAAPGE LVNAIRTVAR
GDAVLGPTAA RRLVDRFAAL PADSGSDRAA RPEIVHDLTE REREVFLLVA RGYSNREIAG
RLHLSEHTVK VHVGRILAKL DLRDRIQAVV LAYESGLVIP EID
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