More than 300 homologs were found in PanDaTox collection
for query gene Ndas_4417 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_4417  two component transcriptional regulator, LuxR family  100 
 
 
232 aa  444  1.0000000000000001e-124  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8799  response regulator receiver protein  72.69 
 
 
227 aa  299  2e-80  Streptosporangium roseum DSM 43021  Bacteria  normal  0.755207  normal 
 
 
-
 
NC_007333  Tfu_2233  LuxR response regulator receiver  68.98 
 
 
228 aa  280  2e-74  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5656  two component transcriptional regulator, LuxR family  62.73 
 
 
222 aa  243  1.9999999999999999e-63  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2024  two component transcriptional regulator, LuxR family  57.01 
 
 
220 aa  229  2e-59  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.876474  normal 
 
 
-
 
NC_009380  Strop_0395  two component LuxR family transcriptional regulator  62.67 
 
 
217 aa  227  1e-58  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2469  two component transcriptional regulator, LuxR family  57.53 
 
 
229 aa  227  1e-58  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000889267  n/a   
 
 
-
 
NC_009953  Sare_1603  two component LuxR family transcriptional regulator  64.95 
 
 
245 aa  224  6e-58  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0252513 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  56.42 
 
 
230 aa  224  7e-58  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013595  Sros_4219  response regulator receiver protein  59.26 
 
 
217 aa  223  3e-57  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.0092025  hitchhiker  0.000784643 
 
 
-
 
NC_013530  Xcel_0759  two component transcriptional regulator, LuxR family  58.57 
 
 
221 aa  221  6e-57  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.174089  n/a   
 
 
-
 
NC_014151  Cfla_0822  two component transcriptional regulator, LuxR family  55.31 
 
 
229 aa  218  8.999999999999998e-56  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1125  two component transcriptional regulator, LuxR family  58.18 
 
 
229 aa  216  2e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.306134 
 
 
-
 
NC_013757  Gobs_1986  two component transcriptional regulator, LuxR family  56.42 
 
 
226 aa  214  8e-55  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  53.24 
 
 
219 aa  212  4.9999999999999996e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2010  two component transcriptional regulator, LuxR family  55.87 
 
 
214 aa  211  9e-54  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1318  response regulator receiver  55.96 
 
 
225 aa  210  2e-53  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_2514  two component transcriptional regulator, LuxR family  50.46 
 
 
230 aa  209  2e-53  Jonesia denitrificans DSM 20603  Bacteria  normal  0.135771  normal  0.887193 
 
 
-
 
NC_013521  Sked_26900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.35 
 
 
247 aa  207  1e-52  Sanguibacter keddieii DSM 10542  Bacteria  hitchhiker  0.00793239  normal  0.935402 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50 
 
 
222 aa  207  1e-52  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_009921  Franean1_2268  two component LuxR family transcriptional regulator  53.88 
 
 
250 aa  207  2e-52  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.00478344  normal  0.0390494 
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  53.02 
 
 
215 aa  204  8e-52  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_013093  Amir_3314  two component transcriptional regulator, LuxR family  54.88 
 
 
222 aa  204  8e-52  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.00833126  n/a   
 
 
-
 
NC_012669  Bcav_2689  two component transcriptional regulator, LuxR family  57.66 
 
 
223 aa  203  1e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.364406  normal  0.346923 
 
 
-
 
NC_013441  Gbro_2730  response regulator receiver  50.47 
 
 
216 aa  201  9.999999999999999e-51  Gordonia bronchialis DSM 43247  Bacteria  normal  0.776601  n/a   
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  50.22 
 
 
228 aa  196  2.0000000000000003e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013093  Amir_0601  two component transcriptional regulator, LuxR family  53.24 
 
 
215 aa  196  3e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  52.34 
 
 
215 aa  194  7e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_013739  Cwoe_0366  two component transcriptional regulator, LuxR family  56.94 
 
 
220 aa  194  9e-49  Conexibacter woesei DSM 14684  Bacteria  normal  0.0587069  normal  0.203995 
 
 
-
 
NC_014210  Ndas_2780  two component transcriptional regulator, LuxR family  52.56 
 
 
219 aa  192  3e-48  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.855193  normal  0.402473 
 
 
-
 
NC_013595  Sros_4672  response regulator receiver protein  51.16 
 
 
212 aa  192  3e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.223352  normal  0.339353 
 
 
-
 
NC_013947  Snas_1960  two component transcriptional regulator, LuxR family  51.85 
 
 
216 aa  191  1e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5068  two component transcriptional regulator, LuxR family  56.02 
 
 
220 aa  188  8e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.708369  normal 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  50.48 
 
 
213 aa  187  1e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3714  two component transcriptional regulator, LuxR family  49.53 
 
 
225 aa  187  1e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.176655 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  47.03 
 
 
239 aa  186  2e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  48.86 
 
 
227 aa  186  2e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  48.6 
 
 
225 aa  187  2e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013093  Amir_4995  two component transcriptional regulator, LuxR family  56.16 
 
 
218 aa  187  2e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2225  two component transcriptional regulator, LuxR family  52.83 
 
 
209 aa  186  2e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6161  response regulator receiver protein  49.53 
 
 
221 aa  186  3e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.902987  decreased coverage  0.000109123 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  49.77 
 
 
225 aa  184  1.0000000000000001e-45  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  49.76 
 
 
218 aa  184  1.0000000000000001e-45  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  47.3 
 
 
225 aa  184  1.0000000000000001e-45  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  49.3 
 
 
226 aa  183  2.0000000000000003e-45  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  49.77 
 
 
302 aa  183  2.0000000000000003e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  47.62 
 
 
219 aa  183  3e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  47.69 
 
 
226 aa  182  5.0000000000000004e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  49.08 
 
 
220 aa  182  5.0000000000000004e-45  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  45.66 
 
 
231 aa  182  5.0000000000000004e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  49.54 
 
 
224 aa  182  5.0000000000000004e-45  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_012669  Bcav_0404  two component transcriptional regulator, LuxR family  47.91 
 
 
218 aa  181  6e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0987348  normal 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  46.98 
 
 
219 aa  181  8.000000000000001e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013947  Snas_1883  two component transcriptional regulator, LuxR family  51.85 
 
 
215 aa  181  1e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0780809 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  49.3 
 
 
218 aa  181  1e-44  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_012669  Bcav_0296  two component transcriptional regulator, LuxR family  54.64 
 
 
198 aa  181  1e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.1736  normal 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  47.93 
 
 
225 aa  179  2e-44  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013595  Sros_3669  response regulator receiver protein  51.42 
 
 
213 aa  179  2e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  47.98 
 
 
217 aa  179  2e-44  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  48.11 
 
 
227 aa  179  2.9999999999999997e-44  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_010816  BLD_0671  putative response regulator  39.76 
 
 
248 aa  179  4.999999999999999e-44  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  46.51 
 
 
221 aa  179  4.999999999999999e-44  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.53 
 
 
226 aa  178  4.999999999999999e-44  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  50 
 
 
229 aa  179  4.999999999999999e-44  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  49.53 
 
 
219 aa  178  5.999999999999999e-44  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  46.82 
 
 
215 aa  178  5.999999999999999e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.39 
 
 
236 aa  178  7e-44  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013739  Cwoe_0676  two component transcriptional regulator, LuxR family  46.51 
 
 
215 aa  178  8e-44  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_25620  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.76 
 
 
219 aa  177  8e-44  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.263807 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  47.49 
 
 
224 aa  177  9e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  50.22 
 
 
225 aa  177  1e-43  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  49.55 
 
 
220 aa  177  1e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  47.2 
 
 
225 aa  176  2e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  48.4 
 
 
221 aa  176  2e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_007333  Tfu_1403  LuxR response regulator receiver  49.53 
 
 
214 aa  176  3e-43  Thermobifida fusca YX  Bacteria  normal  0.676683  n/a   
 
 
-
 
NC_014210  Ndas_2489  two component transcriptional regulator, LuxR family  55.67 
 
 
226 aa  176  3e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.526711  normal  0.682115 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  45.91 
 
 
218 aa  176  3e-43  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  44.3 
 
 
228 aa  175  5e-43  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2445  response regulator receiver protein  49.07 
 
 
218 aa  175  6e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0115114  normal  0.02149 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.02 
 
 
230 aa  175  6e-43  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013510  Tcur_2233  two component transcriptional regulator, LuxR family  50 
 
 
232 aa  174  8e-43  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00197033  n/a   
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  47.73 
 
 
225 aa  174  8e-43  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  47.71 
 
 
214 aa  174  8e-43  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  45.91 
 
 
219 aa  174  8e-43  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  47.25 
 
 
214 aa  174  8e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013947  Snas_3324  two component transcriptional regulator, LuxR family  52.31 
 
 
219 aa  174  9e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0107044  normal  0.345616 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  48.2 
 
 
222 aa  174  9e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  48.85 
 
 
220 aa  174  9.999999999999999e-43  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.61 
 
 
225 aa  174  9.999999999999999e-43  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  48.15 
 
 
215 aa  174  9.999999999999999e-43  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  48.62 
 
 
223 aa  174  9.999999999999999e-43  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_014210  Ndas_4254  two component transcriptional regulator, LuxR family  46.26 
 
 
225 aa  174  9.999999999999999e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.867992  normal  0.287586 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  46.79 
 
 
230 aa  173  1.9999999999999998e-42  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  48.37 
 
 
215 aa  173  1.9999999999999998e-42  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  47.25 
 
 
222 aa  173  2.9999999999999996e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  47.39 
 
 
213 aa  172  2.9999999999999996e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6351  two component LuxR family transcriptional regulator  45.16 
 
 
244 aa  172  3.9999999999999995e-42  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  46.05 
 
 
234 aa  172  3.9999999999999995e-42  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  46.4 
 
 
224 aa  172  3.9999999999999995e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013159  Svir_39200  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  44.04 
 
 
218 aa  172  5e-42  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.254077 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>