More than 300 homologs were found in PanDaTox collection
for query gene Amir_3314 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_3314  two component transcriptional regulator, LuxR family  100 
 
 
222 aa  409  1e-113  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.00833126  n/a   
 
 
-
 
NC_013739  Cwoe_5656  two component transcriptional regulator, LuxR family  57.99 
 
 
222 aa  219  1.9999999999999999e-56  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4417  two component transcriptional regulator, LuxR family  54.88 
 
 
232 aa  204  7e-52  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4672  response regulator receiver protein  54.17 
 
 
212 aa  201  9e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.223352  normal  0.339353 
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  52.53 
 
 
215 aa  198  5e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_013174  Jden_2514  two component transcriptional regulator, LuxR family  49.77 
 
 
230 aa  197  1.0000000000000001e-49  Jonesia denitrificans DSM 20603  Bacteria  normal  0.135771  normal  0.887193 
 
 
-
 
NC_013530  Xcel_0759  two component transcriptional regulator, LuxR family  55.61 
 
 
221 aa  196  2.0000000000000003e-49  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.174089  n/a   
 
 
-
 
NC_014210  Ndas_2024  two component transcriptional regulator, LuxR family  53.18 
 
 
220 aa  196  2.0000000000000003e-49  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.876474  normal 
 
 
-
 
NC_007333  Tfu_2233  LuxR response regulator receiver  52.78 
 
 
228 aa  196  3e-49  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_0395  two component LuxR family transcriptional regulator  55.56 
 
 
217 aa  195  4.0000000000000005e-49  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1125  two component transcriptional regulator, LuxR family  55.05 
 
 
229 aa  192  2e-48  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.306134 
 
 
-
 
NC_013595  Sros_8799  response regulator receiver protein  54.63 
 
 
227 aa  190  1e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.755207  normal 
 
 
-
 
NC_013595  Sros_4219  response regulator receiver protein  53.18 
 
 
217 aa  189  2.9999999999999997e-47  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.0092025  hitchhiker  0.000784643 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  52.27 
 
 
224 aa  186  2e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  49.32 
 
 
230 aa  186  3e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013947  Snas_1883  two component transcriptional regulator, LuxR family  53.67 
 
 
215 aa  185  4e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0780809 
 
 
-
 
NC_013595  Sros_6161  response regulator receiver protein  50 
 
 
221 aa  185  5e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.902987  decreased coverage  0.000109123 
 
 
-
 
NC_013441  Gbro_2730  response regulator receiver  49.07 
 
 
216 aa  184  9e-46  Gordonia bronchialis DSM 43247  Bacteria  normal  0.776601  n/a   
 
 
-
 
NC_014151  Cfla_0822  two component transcriptional regulator, LuxR family  50.93 
 
 
229 aa  183  2.0000000000000003e-45  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  50 
 
 
215 aa  182  2.0000000000000003e-45  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_013595  Sros_3669  response regulator receiver protein  53.24 
 
 
213 aa  182  3e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_1603  two component LuxR family transcriptional regulator  55.56 
 
 
245 aa  182  4.0000000000000006e-45  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0252513 
 
 
-
 
NC_008699  Noca_1318  response regulator receiver  51.35 
 
 
225 aa  182  5.0000000000000004e-45  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3714  two component transcriptional regulator, LuxR family  49.77 
 
 
225 aa  180  2e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.176655 
 
 
-
 
NC_013947  Snas_1960  two component transcriptional regulator, LuxR family  49.54 
 
 
216 aa  179  2.9999999999999997e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_25620  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.77 
 
 
219 aa  177  1e-43  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.263807 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.44 
 
 
222 aa  176  2e-43  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_013757  Gobs_1986  two component transcriptional regulator, LuxR family  47.22 
 
 
226 aa  177  2e-43  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2689  two component transcriptional regulator, LuxR family  54.26 
 
 
223 aa  176  2e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.364406  normal  0.346923 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.61 
 
 
226 aa  176  4e-43  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_26900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.5 
 
 
247 aa  175  4e-43  Sanguibacter keddieii DSM 10542  Bacteria  hitchhiker  0.00793239  normal  0.935402 
 
 
-
 
NC_013093  Amir_2010  two component transcriptional regulator, LuxR family  47.22 
 
 
214 aa  174  9e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  48.15 
 
 
219 aa  173  1.9999999999999998e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  48.86 
 
 
223 aa  173  1.9999999999999998e-42  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_012669  Bcav_0296  two component transcriptional regulator, LuxR family  54.77 
 
 
198 aa  173  1.9999999999999998e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.1736  normal 
 
 
-
 
NC_013510  Tcur_2469  two component transcriptional regulator, LuxR family  48.18 
 
 
229 aa  172  3.9999999999999995e-42  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000889267  n/a   
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  49.77 
 
 
226 aa  172  5e-42  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  50.69 
 
 
229 aa  170  1e-41  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  48.33 
 
 
230 aa  168  6e-41  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  47.71 
 
 
222 aa  168  6e-41  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_02400  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.03 
 
 
255 aa  168  6e-41  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  47.64 
 
 
218 aa  168  7e-41  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  50.23 
 
 
225 aa  167  1e-40  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_014210  Ndas_2780  two component transcriptional regulator, LuxR family  46.76 
 
 
219 aa  167  1e-40  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.855193  normal  0.402473 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  49.54 
 
 
247 aa  167  1e-40  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  48.8 
 
 
214 aa  167  1e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  46.3 
 
 
219 aa  167  2e-40  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_2268  two component LuxR family transcriptional regulator  50 
 
 
250 aa  166  2e-40  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.00478344  normal  0.0390494 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  46.79 
 
 
227 aa  167  2e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  43.52 
 
 
220 aa  165  5e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  45.7 
 
 
222 aa  165  5e-40  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
NC_013510  Tcur_1300  two component transcriptional regulator, LuxR family  46.7 
 
 
215 aa  165  5.9999999999999996e-40  Thermomonospora curvata DSM 43183  Bacteria  normal  0.145336  n/a   
 
 
-
 
NC_013947  Snas_0607  two component transcriptional regulator, LuxR family  47.42 
 
 
216 aa  164  1.0000000000000001e-39  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  46.79 
 
 
226 aa  164  1.0000000000000001e-39  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  48.13 
 
 
222 aa  164  1.0000000000000001e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  45.5 
 
 
223 aa  163  2.0000000000000002e-39  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0556432 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  44.34 
 
 
239 aa  163  2.0000000000000002e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  43.72 
 
 
233 aa  162  3e-39  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013169  Ksed_06250  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.71 
 
 
228 aa  162  4.0000000000000004e-39  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  47.42 
 
 
225 aa  162  4.0000000000000004e-39  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_014210  Ndas_2489  two component transcriptional regulator, LuxR family  53.97 
 
 
226 aa  162  5.0000000000000005e-39  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.526711  normal  0.682115 
 
 
-
 
NC_013947  Snas_5068  two component transcriptional regulator, LuxR family  50 
 
 
220 aa  162  5.0000000000000005e-39  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.708369  normal 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  45.75 
 
 
225 aa  162  5.0000000000000005e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_013595  Sros_5499  response regulator receiver protein  46.23 
 
 
213 aa  161  7e-39  Streptosporangium roseum DSM 43021  Bacteria  decreased coverage  0.00659712  normal  0.108677 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  46.54 
 
 
228 aa  161  8.000000000000001e-39  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  46.05 
 
 
220 aa  160  1e-38  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  48.66 
 
 
225 aa  159  2e-38  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013739  Cwoe_0366  two component transcriptional regulator, LuxR family  50.93 
 
 
220 aa  159  2e-38  Conexibacter woesei DSM 14684  Bacteria  normal  0.0587069  normal  0.203995 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.08 
 
 
230 aa  160  2e-38  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013093  Amir_3004  two component transcriptional regulator, LuxR family  47.89 
 
 
223 aa  159  3e-38  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0522265  n/a   
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  44.76 
 
 
221 aa  159  3e-38  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013595  Sros_8800  response regulator receiver protein  45.24 
 
 
215 aa  159  3e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  0.752334  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  46.64 
 
 
226 aa  159  3e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_009921  Franean1_3846  two component LuxR family transcriptional regulator  47.2 
 
 
249 aa  159  4e-38  Frankia sp. EAN1pec  Bacteria  normal  0.525033  normal  0.770826 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  48.85 
 
 
241 aa  158  5e-38  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  49.06 
 
 
218 aa  159  5e-38  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  47.2 
 
 
234 aa  158  6e-38  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  45.33 
 
 
234 aa  157  1e-37  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  46.08 
 
 
225 aa  157  1e-37  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013947  Snas_5550  two component transcriptional regulator, LuxR family  44.65 
 
 
213 aa  157  1e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.159917  normal  0.0692801 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  45.79 
 
 
231 aa  157  1e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  45.28 
 
 
223 aa  157  1e-37  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  45 
 
 
226 aa  157  2e-37  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013093  Amir_4995  two component transcriptional regulator, LuxR family  50.46 
 
 
218 aa  156  2e-37  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7377  response regulator receiver protein  47.64 
 
 
216 aa  157  2e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  0.92051  normal 
 
 
-
 
NC_011886  Achl_3380  two component transcriptional regulator, LuxR family  45.54 
 
 
222 aa  155  3e-37  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  46.15 
 
 
220 aa  155  5.0000000000000005e-37  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2710  two component transcriptional regulator, LuxR family  45.5 
 
 
230 aa  155  5.0000000000000005e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.248821  normal  0.606697 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  43.98 
 
 
228 aa  155  6e-37  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013093  Amir_4001  two component transcriptional regulator, LuxR family  46.48 
 
 
217 aa  155  6e-37  Actinosynnema mirum DSM 43827  Bacteria  normal  0.380782  n/a   
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  46.08 
 
 
225 aa  155  6e-37  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  46.41 
 
 
224 aa  155  6e-37  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  44.5 
 
 
220 aa  154  7e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  48.37 
 
 
222 aa  154  8e-37  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  46.98 
 
 
228 aa  154  8e-37  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  46.82 
 
 
249 aa  154  1e-36  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal 
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  46.15 
 
 
214 aa  154  1e-36  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  44.34 
 
 
219 aa  154  1e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  47.85 
 
 
218 aa  154  1e-36  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013510  Tcur_2233  two component transcriptional regulator, LuxR family  48.61 
 
 
232 aa  154  1e-36  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00197033  n/a   
 
 
-
 
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