More than 300 homologs were found in PanDaTox collection
for query gene Ndas_4254 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_4254  two component transcriptional regulator, LuxR family  100 
 
 
225 aa  430  1e-120  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.867992  normal  0.287586 
 
 
-
 
NC_013947  Snas_5262  two component transcriptional regulator, LuxR family  64.49 
 
 
219 aa  265  5e-70  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  64.98 
 
 
226 aa  263  1e-69  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_013595  Sros_2445  response regulator receiver protein  64.81 
 
 
218 aa  258  4e-68  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0115114  normal  0.02149 
 
 
-
 
NC_014210  Ndas_0782  two component transcriptional regulator, LuxR family  63.13 
 
 
220 aa  241  7.999999999999999e-63  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_3696  two component transcriptional regulator, LuxR family  61.75 
 
 
217 aa  234  8e-61  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  55.09 
 
 
215 aa  227  1e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  50.69 
 
 
215 aa  209  3e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  51.83 
 
 
223 aa  204  7e-52  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  52.56 
 
 
230 aa  204  1e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013510  Tcur_4551  two component transcriptional regulator, LuxR family  60.83 
 
 
220 aa  202  5e-51  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  50.45 
 
 
239 aa  196  3e-49  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  52.51 
 
 
221 aa  194  1e-48  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  48.86 
 
 
221 aa  189  2.9999999999999997e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  48.85 
 
 
215 aa  189  2.9999999999999997e-47  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  49.32 
 
 
220 aa  189  4e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  48.62 
 
 
218 aa  188  7e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  47.95 
 
 
216 aa  187  1e-46  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  47.95 
 
 
222 aa  187  1e-46  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  48.2 
 
 
227 aa  187  1e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  48.4 
 
 
226 aa  186  2e-46  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  51.12 
 
 
227 aa  186  3e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_014210  Ndas_1125  two component transcriptional regulator, LuxR family  49.08 
 
 
229 aa  186  3e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.306134 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  49.3 
 
 
220 aa  186  3e-46  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  45.21 
 
 
224 aa  185  5e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  46.58 
 
 
221 aa  185  6e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  49.55 
 
 
229 aa  185  6e-46  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  44.55 
 
 
223 aa  184  9e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.3 
 
 
222 aa  184  1.0000000000000001e-45  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  48.37 
 
 
226 aa  184  1.0000000000000001e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  47.03 
 
 
219 aa  183  2.0000000000000003e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  50.92 
 
 
224 aa  183  2.0000000000000003e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.05 
 
 
226 aa  183  2.0000000000000003e-45  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  48.15 
 
 
217 aa  183  2.0000000000000003e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  49.77 
 
 
218 aa  182  3e-45  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  44.95 
 
 
230 aa  182  3e-45  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  45.5 
 
 
230 aa  182  5.0000000000000004e-45  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  47.93 
 
 
224 aa  182  5.0000000000000004e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  47.06 
 
 
217 aa  181  6e-45  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013739  Cwoe_0366  two component transcriptional regulator, LuxR family  47.93 
 
 
220 aa  181  6e-45  Conexibacter woesei DSM 14684  Bacteria  normal  0.0587069  normal  0.203995 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  48.62 
 
 
222 aa  181  6e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_014210  Ndas_2780  two component transcriptional regulator, LuxR family  48.86 
 
 
219 aa  181  8.000000000000001e-45  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.855193  normal  0.402473 
 
 
-
 
NC_014151  Cfla_0857  two component transcriptional regulator, LuxR family  50.23 
 
 
219 aa  181  8.000000000000001e-45  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0762303  normal 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  48.86 
 
 
222 aa  181  9.000000000000001e-45  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  47 
 
 
221 aa  181  9.000000000000001e-45  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_007333  Tfu_2233  LuxR response regulator receiver  45.79 
 
 
228 aa  180  1e-44  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  45.7 
 
 
227 aa  180  1e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  47.3 
 
 
225 aa  180  1e-44  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013093  Amir_5893  two component transcriptional regulator, LuxR family  48.61 
 
 
218 aa  180  2e-44  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  47.22 
 
 
218 aa  179  2e-44  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  47.27 
 
 
226 aa  179  2e-44  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  47 
 
 
225 aa  179  2e-44  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  46.33 
 
 
219 aa  179  2.9999999999999997e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  44.95 
 
 
241 aa  178  7e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  48.61 
 
 
220 aa  177  1e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  46.36 
 
 
225 aa  177  1e-43  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000789071 
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  51.36 
 
 
220 aa  177  1e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  47.09 
 
 
214 aa  177  1e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_007333  Tfu_1403  LuxR response regulator receiver  47.69 
 
 
214 aa  176  2e-43  Thermobifida fusca YX  Bacteria  normal  0.676683  n/a   
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  46.4 
 
 
234 aa  176  2e-43  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  48.15 
 
 
218 aa  176  2e-43  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  48.21 
 
 
228 aa  176  2e-43  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  47.69 
 
 
225 aa  176  3e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  42.59 
 
 
217 aa  176  3e-43  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  45.66 
 
 
220 aa  176  3e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  48.39 
 
 
221 aa  175  4e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  40.76 
 
 
218 aa  175  5e-43  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  43.91 
 
 
234 aa  175  6e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  46.76 
 
 
215 aa  175  6e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_013235  Namu_0523  two component transcriptional regulator, LuxR family  47.3 
 
 
230 aa  175  6e-43  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  48.17 
 
 
221 aa  174  7e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2010  two component transcriptional regulator, LuxR family  46.05 
 
 
214 aa  174  9e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  43.18 
 
 
226 aa  174  9.999999999999999e-43  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  47.44 
 
 
211 aa  174  9.999999999999999e-43  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  45.74 
 
 
239 aa  174  9.999999999999999e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4417  two component transcriptional regulator, LuxR family  46.26 
 
 
232 aa  174  9.999999999999999e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  45.62 
 
 
224 aa  174  9.999999999999999e-43  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  46.08 
 
 
225 aa  173  1.9999999999999998e-42  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  41.74 
 
 
236 aa  173  1.9999999999999998e-42  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  43.12 
 
 
225 aa  173  1.9999999999999998e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  45.45 
 
 
222 aa  173  1.9999999999999998e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013521  Sked_21600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.91 
 
 
222 aa  173  1.9999999999999998e-42  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.49613  normal 
 
 
-
 
NC_012669  Bcav_3028  two component transcriptional regulator, LuxR family  45.66 
 
 
225 aa  173  1.9999999999999998e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.211566  decreased coverage  0.0000266978 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  46.58 
 
 
230 aa  172  2.9999999999999996e-42  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  42.59 
 
 
221 aa  172  3.9999999999999995e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013757  Gobs_1986  two component transcriptional regulator, LuxR family  45.95 
 
 
226 aa  172  3.9999999999999995e-42  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  44.5 
 
 
226 aa  172  3.9999999999999995e-42  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  47.03 
 
 
230 aa  172  3.9999999999999995e-42  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  47.51 
 
 
225 aa  172  3.9999999999999995e-42  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  45.62 
 
 
224 aa  172  3.9999999999999995e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013739  Cwoe_2472  two component transcriptional regulator, LuxR family  47.03 
 
 
221 aa  172  5e-42  Conexibacter woesei DSM 14684  Bacteria  normal  0.0113125  hitchhiker  0.00367669 
 
 
-
 
NC_013947  Snas_3676  two component transcriptional regulator, LuxR family  45.58 
 
 
214 aa  171  5.999999999999999e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0625047  normal  0.0780809 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  39.53 
 
 
216 aa  171  5.999999999999999e-42  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4857  two component transcriptional regulator, LuxR family  46.15 
 
 
234 aa  171  5.999999999999999e-42  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.243741 
 
 
-
 
NC_013947  Snas_0541  two component transcriptional regulator, LuxR family  43.52 
 
 
221 aa  171  5.999999999999999e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.318618  normal 
 
 
-
 
NC_013595  Sros_5499  response regulator receiver protein  45.37 
 
 
213 aa  171  5.999999999999999e-42  Streptosporangium roseum DSM 43021  Bacteria  decreased coverage  0.00659712  normal  0.108677 
 
 
-
 
NC_008697  Noca_4896  response regulator receiver  47 
 
 
215 aa  171  6.999999999999999e-42  Nocardioides sp. JS614  Bacteria  normal  0.446448  normal  0.220667 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  45.21 
 
 
219 aa  171  6.999999999999999e-42  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  46.12 
 
 
223 aa  171  7.999999999999999e-42  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_009921  Franean1_6511  two component LuxR family transcriptional regulator  44.04 
 
 
215 aa  171  9e-42  Frankia sp. EAN1pec  Bacteria  normal  normal  0.100644 
 
 
-
 
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