More than 300 homologs were found in PanDaTox collection
for query gene Gbro_2730 on replicon NC_013441
Organism: Gordonia bronchialis DSM 43247



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013441  Gbro_2730  response regulator receiver  100 
 
 
216 aa  425  1e-118  Gordonia bronchialis DSM 43247  Bacteria  normal  0.776601  n/a   
 
 
-
 
NC_013757  Gobs_1986  two component transcriptional regulator, LuxR family  62.39 
 
 
226 aa  246  3e-64  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1318  response regulator receiver  56.16 
 
 
225 aa  228  5e-59  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0759  two component transcriptional regulator, LuxR family  58.1 
 
 
221 aa  221  9.999999999999999e-57  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.174089  n/a   
 
 
-
 
NC_013595  Sros_8799  response regulator receiver protein  54.63 
 
 
227 aa  217  1e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.755207  normal 
 
 
-
 
NC_013174  Jden_2514  two component transcriptional regulator, LuxR family  54.17 
 
 
230 aa  217  1e-55  Jonesia denitrificans DSM 20603  Bacteria  normal  0.135771  normal  0.887193 
 
 
-
 
NC_009380  Strop_0395  two component LuxR family transcriptional regulator  55.14 
 
 
217 aa  214  5.9999999999999996e-55  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_1603  two component LuxR family transcriptional regulator  54.67 
 
 
245 aa  214  5.9999999999999996e-55  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0252513 
 
 
-
 
NC_007333  Tfu_2233  LuxR response regulator receiver  52.83 
 
 
228 aa  211  4.9999999999999996e-54  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  52.11 
 
 
230 aa  209  2e-53  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_014210  Ndas_1125  two component transcriptional regulator, LuxR family  53.92 
 
 
229 aa  208  5e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.306134 
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  52.13 
 
 
215 aa  207  1e-52  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_014151  Cfla_0822  two component transcriptional regulator, LuxR family  52.8 
 
 
229 aa  204  7e-52  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_5656  two component transcriptional regulator, LuxR family  53.3 
 
 
222 aa  204  1e-51  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4672  response regulator receiver protein  51.17 
 
 
212 aa  202  2e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.223352  normal  0.339353 
 
 
-
 
NC_013595  Sros_4219  response regulator receiver protein  51.87 
 
 
217 aa  203  2e-51  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.0092025  hitchhiker  0.000784643 
 
 
-
 
NC_014210  Ndas_4417  two component transcriptional regulator, LuxR family  50.47 
 
 
232 aa  201  9.999999999999999e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2024  two component transcriptional regulator, LuxR family  52.34 
 
 
220 aa  199  1.9999999999999998e-50  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.876474  normal 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.36 
 
 
222 aa  199  3e-50  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_013521  Sked_26900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.67 
 
 
247 aa  195  4.0000000000000005e-49  Sanguibacter keddieii DSM 10542  Bacteria  hitchhiker  0.00793239  normal  0.935402 
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  50.47 
 
 
215 aa  190  1e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  49.54 
 
 
219 aa  189  2.9999999999999997e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  47.64 
 
 
226 aa  189  2.9999999999999997e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_013739  Cwoe_0366  two component transcriptional regulator, LuxR family  52.83 
 
 
220 aa  189  4e-47  Conexibacter woesei DSM 14684  Bacteria  normal  0.0587069  normal  0.203995 
 
 
-
 
NC_013510  Tcur_2469  two component transcriptional regulator, LuxR family  51.85 
 
 
229 aa  188  5e-47  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000889267  n/a   
 
 
-
 
NC_013947  Snas_3714  two component transcriptional regulator, LuxR family  50.47 
 
 
225 aa  187  1e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.176655 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  45.75 
 
 
224 aa  186  3e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_014210  Ndas_2780  two component transcriptional regulator, LuxR family  48.85 
 
 
219 aa  186  3e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.855193  normal  0.402473 
 
 
-
 
NC_013093  Amir_3314  two component transcriptional regulator, LuxR family  49.07 
 
 
222 aa  184  8e-46  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.00833126  n/a   
 
 
-
 
NC_013093  Amir_5893  two component transcriptional regulator, LuxR family  44.6 
 
 
218 aa  184  1.0000000000000001e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  46.58 
 
 
234 aa  182  3e-45  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  46.88 
 
 
227 aa  182  4.0000000000000006e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.25 
 
 
230 aa  180  1e-44  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013947  Snas_5262  two component transcriptional regulator, LuxR family  45.07 
 
 
219 aa  180  1e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  45.28 
 
 
225 aa  179  2e-44  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013093  Amir_2010  two component transcriptional regulator, LuxR family  47.69 
 
 
214 aa  180  2e-44  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  47.27 
 
 
226 aa  179  2e-44  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_012669  Bcav_2689  two component transcriptional regulator, LuxR family  52.13 
 
 
223 aa  179  2e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.364406  normal  0.346923 
 
 
-
 
NC_013521  Sked_25620  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.2 
 
 
219 aa  178  4.999999999999999e-44  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.263807 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  44.55 
 
 
226 aa  178  5.999999999999999e-44  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013947  Snas_5068  two component transcriptional regulator, LuxR family  50.23 
 
 
220 aa  178  5.999999999999999e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.708369  normal 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.36 
 
 
236 aa  177  9e-44  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013172  Bfae_02400  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.59 
 
 
255 aa  177  9e-44  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  45.37 
 
 
225 aa  177  1e-43  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_009921  Franean1_2268  two component LuxR family transcriptional regulator  46.98 
 
 
250 aa  176  2e-43  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.00478344  normal  0.0390494 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  41.18 
 
 
233 aa  176  3e-43  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  45.29 
 
 
226 aa  174  8e-43  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  44.86 
 
 
213 aa  173  1.9999999999999998e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  44.13 
 
 
218 aa  173  1.9999999999999998e-42  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  44.14 
 
 
241 aa  171  5.999999999999999e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  43.4 
 
 
239 aa  171  6.999999999999999e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008697  Noca_4896  response regulator receiver  45.33 
 
 
215 aa  171  6.999999999999999e-42  Nocardioides sp. JS614  Bacteria  normal  0.446448  normal  0.220667 
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  44.1 
 
 
239 aa  170  1e-41  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.58 
 
 
229 aa  171  1e-41  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013093  Amir_0601  two component transcriptional regulator, LuxR family  45.07 
 
 
215 aa  169  2e-41  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  43.58 
 
 
224 aa  170  2e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  43.52 
 
 
221 aa  170  2e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013595  Sros_3669  response regulator receiver protein  45.5 
 
 
213 aa  169  2e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  42.25 
 
 
221 aa  169  3e-41  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_009380  Strop_4132  response regulator receiver  45.41 
 
 
235 aa  168  7e-41  Salinispora tropica CNB-440  Bacteria  normal  0.232221  normal 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  44.81 
 
 
226 aa  167  8e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  45.05 
 
 
229 aa  167  1e-40  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  45.12 
 
 
228 aa  166  2e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.3 
 
 
244 aa  166  2e-40  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  43.38 
 
 
220 aa  166  2.9999999999999998e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_6161  response regulator receiver protein  43.4 
 
 
221 aa  166  2.9999999999999998e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  0.902987  decreased coverage  0.000109123 
 
 
-
 
NC_013093  Amir_4995  two component transcriptional regulator, LuxR family  47.17 
 
 
218 aa  165  4e-40  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  44.86 
 
 
221 aa  166  4e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  44.55 
 
 
225 aa  166  4e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  35.48 
 
 
261 aa  165  5e-40  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_014210  Ndas_0782  two component transcriptional regulator, LuxR family  44.34 
 
 
220 aa  165  5e-40  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  44.19 
 
 
220 aa  165  5e-40  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_2472  two component transcriptional regulator, LuxR family  45.12 
 
 
221 aa  165  5e-40  Conexibacter woesei DSM 14684  Bacteria  normal  0.0113125  hitchhiker  0.00367669 
 
 
-
 
NC_013947  Snas_0178  two component transcriptional regulator, LuxR family  46.95 
 
 
221 aa  165  5.9999999999999996e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  37.92 
 
 
248 aa  165  5.9999999999999996e-40  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  46.01 
 
 
217 aa  164  6.9999999999999995e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  42.2 
 
 
231 aa  164  6.9999999999999995e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  40 
 
 
218 aa  164  8e-40  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_009921  Franean1_6351  two component LuxR family transcriptional regulator  42.45 
 
 
244 aa  164  8e-40  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  44.05 
 
 
242 aa  164  8e-40  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  42.99 
 
 
230 aa  164  8e-40  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  42.73 
 
 
223 aa  164  1.0000000000000001e-39  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  45.28 
 
 
228 aa  163  1.0000000000000001e-39  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  44.34 
 
 
224 aa  164  1.0000000000000001e-39  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_011884  Cyan7425_3249  two component transcriptional regulator, LuxR family  45.19 
 
 
211 aa  163  1.0000000000000001e-39  Cyanothece sp. PCC 7425  Bacteria  normal  0.414819  normal  0.558116 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  42.15 
 
 
227 aa  163  2.0000000000000002e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  45 
 
 
261 aa  163  2.0000000000000002e-39  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  44.29 
 
 
234 aa  162  2.0000000000000002e-39  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  44.44 
 
 
214 aa  162  3e-39  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  44.29 
 
 
225 aa  162  3e-39  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  43.98 
 
 
218 aa  162  4.0000000000000004e-39  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  42.59 
 
 
223 aa  162  4.0000000000000004e-39  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  44.55 
 
 
228 aa  162  4.0000000000000004e-39  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  42.47 
 
 
228 aa  162  5.0000000000000005e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  42.8 
 
 
250 aa  162  5.0000000000000005e-39  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1874  two component transcriptional regulator, LuxR family  46.36 
 
 
213 aa  161  5.0000000000000005e-39  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.635222  n/a   
 
 
-
 
NC_013739  Cwoe_0615  two component transcriptional regulator, LuxR family  41.94 
 
 
216 aa  161  6e-39  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_21850  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.72 
 
 
222 aa  161  7e-39  Micrococcus luteus NCTC 2665  Bacteria  normal  0.118113  n/a   
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  45.12 
 
 
224 aa  161  7e-39  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013947  Snas_1883  two component transcriptional regulator, LuxR family  49.28 
 
 
215 aa  160  9e-39  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0780809 
 
 
-
 
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