More than 300 homologs were found in PanDaTox collection
for query gene Noca_4896 on replicon NC_008697
Organism: Nocardioides sp. JS614



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008697  Noca_4896  response regulator receiver  100 
 
 
215 aa  409  1e-113  Nocardioides sp. JS614  Bacteria  normal  0.446448  normal  0.220667 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  53.49 
 
 
226 aa  211  9e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  54.93 
 
 
228 aa  209  2e-53  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  52.97 
 
 
227 aa  206  2e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  51.4 
 
 
224 aa  205  4e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  53.74 
 
 
234 aa  205  5e-52  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  56.88 
 
 
227 aa  204  6e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  53.24 
 
 
225 aa  204  9e-52  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000789071 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  51.32 
 
 
242 aa  204  1e-51  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  50.7 
 
 
225 aa  202  4e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  51.42 
 
 
220 aa  201  5e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013530  Xcel_2717  two component transcriptional regulator, LuxR family  52.58 
 
 
223 aa  201  5e-51  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  53.21 
 
 
226 aa  201  7e-51  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  51.82 
 
 
226 aa  201  9.999999999999999e-51  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013521  Sked_21600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.21 
 
 
222 aa  201  9.999999999999999e-51  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.49613  normal 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  52.56 
 
 
219 aa  200  1.9999999999999998e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  51.63 
 
 
219 aa  199  1.9999999999999998e-50  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  48.9 
 
 
233 aa  199  3e-50  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  52.09 
 
 
226 aa  198  3.9999999999999996e-50  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  51.83 
 
 
221 aa  199  3.9999999999999996e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  50.23 
 
 
224 aa  198  5e-50  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  50.23 
 
 
218 aa  198  5e-50  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  52.53 
 
 
217 aa  198  5e-50  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  50.45 
 
 
226 aa  197  1.0000000000000001e-49  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  50.23 
 
 
239 aa  196  2.0000000000000003e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  51.16 
 
 
220 aa  196  2.0000000000000003e-49  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  49.53 
 
 
218 aa  196  2.0000000000000003e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  54.02 
 
 
229 aa  196  2.0000000000000003e-49  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  50.7 
 
 
218 aa  196  2.0000000000000003e-49  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  52.36 
 
 
220 aa  196  2.0000000000000003e-49  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.27 
 
 
230 aa  196  3e-49  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  51.87 
 
 
219 aa  195  6e-49  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  47.93 
 
 
224 aa  194  8.000000000000001e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  48.86 
 
 
223 aa  194  1e-48  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  47.66 
 
 
225 aa  194  1e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  50.47 
 
 
225 aa  194  1e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  50.45 
 
 
231 aa  194  1e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  51.4 
 
 
215 aa  192  3e-48  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  50.93 
 
 
219 aa  192  3e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  53 
 
 
224 aa  192  3e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  52.05 
 
 
225 aa  192  4e-48  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  47.71 
 
 
221 aa  191  5e-48  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  50.68 
 
 
225 aa  191  6e-48  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  49.77 
 
 
221 aa  191  7e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  50.68 
 
 
234 aa  190  1e-47  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  50.47 
 
 
220 aa  190  1e-47  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.1 
 
 
236 aa  191  1e-47  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013235  Namu_0523  two component transcriptional regulator, LuxR family  52.36 
 
 
230 aa  190  1e-47  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  50.93 
 
 
225 aa  190  1e-47  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  50.24 
 
 
217 aa  190  2e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  48.87 
 
 
222 aa  190  2e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  51.61 
 
 
215 aa  189  4e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.32 
 
 
226 aa  189  4e-47  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  51.83 
 
 
220 aa  188  5e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.39 
 
 
229 aa  188  5.999999999999999e-47  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  48.85 
 
 
230 aa  187  8e-47  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  50.92 
 
 
239 aa  187  1e-46  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  50 
 
 
230 aa  187  1e-46  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0759  two component transcriptional regulator, LuxR family  51.85 
 
 
221 aa  187  1e-46  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.174089  n/a   
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  47.39 
 
 
234 aa  187  1e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  46.19 
 
 
228 aa  186  2e-46  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1403  LuxR response regulator receiver  51.16 
 
 
214 aa  186  3e-46  Thermobifida fusca YX  Bacteria  normal  0.676683  n/a   
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  50.23 
 
 
216 aa  186  3e-46  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  46.98 
 
 
222 aa  185  4e-46  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  53.99 
 
 
214 aa  185  4e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013510  Tcur_2233  two component transcriptional regulator, LuxR family  51.89 
 
 
232 aa  185  4e-46  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00197033  n/a   
 
 
-
 
NC_013739  Cwoe_2472  two component transcriptional regulator, LuxR family  50.23 
 
 
221 aa  185  4e-46  Conexibacter woesei DSM 14684  Bacteria  normal  0.0113125  hitchhiker  0.00367669 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  50.93 
 
 
221 aa  185  4e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  54.17 
 
 
220 aa  185  4e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  49.29 
 
 
218 aa  185  5e-46  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  48.6 
 
 
217 aa  185  5e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  50.7 
 
 
214 aa  185  5e-46  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  46.3 
 
 
220 aa  184  6e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  46.51 
 
 
224 aa  184  7e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  47.49 
 
 
227 aa  184  7e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6705  two component transcriptional regulator, LuxR family  45.78 
 
 
258 aa  184  9e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.318103  normal  0.0731204 
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  48.6 
 
 
216 aa  183  1.0000000000000001e-45  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  47.49 
 
 
228 aa  184  1.0000000000000001e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_009921  Franean1_6511  two component LuxR family transcriptional regulator  50.47 
 
 
215 aa  183  1.0000000000000001e-45  Frankia sp. EAN1pec  Bacteria  normal  normal  0.100644 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  50.46 
 
 
230 aa  184  1.0000000000000001e-45  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  49.77 
 
 
217 aa  184  1.0000000000000001e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6529  two component transcriptional regulator, LuxR family  49.33 
 
 
224 aa  182  2.0000000000000003e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.270807  normal  0.114568 
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  47.89 
 
 
223 aa  183  2.0000000000000003e-45  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0556432 
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  48.8 
 
 
213 aa  183  2.0000000000000003e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  43.8 
 
 
248 aa  183  2.0000000000000003e-45  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_013595  Sros_4672  response regulator receiver protein  45.54 
 
 
212 aa  183  2.0000000000000003e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  0.223352  normal  0.339353 
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  48.71 
 
 
239 aa  182  3e-45  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  48.1 
 
 
211 aa  182  3e-45  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  48.61 
 
 
226 aa  182  3e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  50.23 
 
 
225 aa  182  3e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_014151  Cfla_0857  two component transcriptional regulator, LuxR family  49.3 
 
 
219 aa  182  4.0000000000000006e-45  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0762303  normal 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  48.39 
 
 
224 aa  181  5.0000000000000004e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  46.54 
 
 
230 aa  181  9.000000000000001e-45  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013739  Cwoe_0676  two component transcriptional regulator, LuxR family  48.34 
 
 
215 aa  180  1e-44  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  44.19 
 
 
221 aa  180  1e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  48.7 
 
 
249 aa  181  1e-44  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  46.95 
 
 
261 aa  180  1e-44  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  47.47 
 
 
222 aa  180  2e-44  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  45.25 
 
 
223 aa  179  2e-44  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  46.15 
 
 
223 aa  180  2e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
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