More than 300 homologs were found in PanDaTox collection
for query gene Franean1_6351 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_6351  two component LuxR family transcriptional regulator  100 
 
 
244 aa  485  1e-136  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5499  response regulator receiver protein  60.85 
 
 
213 aa  236  2e-61  Streptosporangium roseum DSM 43021  Bacteria  decreased coverage  0.00659712  normal  0.108677 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  54.98 
 
 
214 aa  224  8e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013947  Snas_0625  two component transcriptional regulator, LuxR family  55.61 
 
 
216 aa  223  3e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.732521  normal 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  52.73 
 
 
224 aa  214  9.999999999999999e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  51.61 
 
 
225 aa  213  2.9999999999999995e-54  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  52.53 
 
 
221 aa  207  1e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  49.33 
 
 
224 aa  206  3e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_014210  Ndas_2190  two component transcriptional regulator, LuxR family  48.82 
 
 
218 aa  205  7e-52  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000643495  hitchhiker  0.000215707 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  48.15 
 
 
215 aa  203  2e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  52.53 
 
 
220 aa  203  2e-51  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  49.77 
 
 
219 aa  201  7e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50 
 
 
226 aa  201  9.999999999999999e-51  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  50.23 
 
 
218 aa  200  1.9999999999999998e-50  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.87 
 
 
225 aa  199  3.9999999999999996e-50  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  49.55 
 
 
228 aa  199  5e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  49.07 
 
 
219 aa  198  5e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  49.3 
 
 
219 aa  198  6e-50  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  47.96 
 
 
225 aa  198  7e-50  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  49.33 
 
 
225 aa  198  7e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  48.39 
 
 
224 aa  197  9e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  51.14 
 
 
230 aa  197  1.0000000000000001e-49  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  47.71 
 
 
223 aa  197  1.0000000000000001e-49  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  50.91 
 
 
227 aa  196  2.0000000000000003e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  49.77 
 
 
221 aa  196  2.0000000000000003e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  50.22 
 
 
230 aa  197  2.0000000000000003e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  49.3 
 
 
211 aa  196  2.0000000000000003e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  52.05 
 
 
230 aa  197  2.0000000000000003e-49  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  46.33 
 
 
239 aa  197  2.0000000000000003e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  49.54 
 
 
220 aa  196  3e-49  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  47.75 
 
 
239 aa  196  3e-49  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  49.09 
 
 
234 aa  196  4.0000000000000005e-49  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  50.45 
 
 
226 aa  195  6e-49  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  49.77 
 
 
225 aa  195  7e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  49.1 
 
 
227 aa  194  8.000000000000001e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  49.08 
 
 
224 aa  194  1e-48  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  49.1 
 
 
221 aa  194  1e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  48.39 
 
 
225 aa  194  1e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  46.98 
 
 
220 aa  193  2e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  48.4 
 
 
225 aa  193  2e-48  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  49.07 
 
 
217 aa  193  2e-48  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  50.69 
 
 
225 aa  192  3e-48  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  45.92 
 
 
244 aa  192  3e-48  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  49.31 
 
 
222 aa  192  3e-48  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  48.62 
 
 
241 aa  192  4e-48  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  47.32 
 
 
226 aa  192  4e-48  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013131  Caci_3748  two component transcriptional regulator, LuxR family  45.95 
 
 
236 aa  191  8e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  47.77 
 
 
225 aa  191  8e-48  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  48.84 
 
 
222 aa  191  1e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.27 
 
 
229 aa  191  1e-47  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  45.09 
 
 
230 aa  191  1e-47  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  50.92 
 
 
215 aa  190  2e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  45.7 
 
 
228 aa  190  2e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  48.43 
 
 
226 aa  189  2.9999999999999997e-47  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  46.79 
 
 
218 aa  189  4e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  48.66 
 
 
234 aa  188  5e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  49.1 
 
 
228 aa  188  5.999999999999999e-47  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  47 
 
 
219 aa  188  5.999999999999999e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  45.91 
 
 
224 aa  188  5.999999999999999e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  47.91 
 
 
219 aa  188  7e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  44.98 
 
 
228 aa  188  7e-47  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  44.59 
 
 
231 aa  188  7e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  49.32 
 
 
220 aa  188  8e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  48.39 
 
 
226 aa  187  9e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  46.33 
 
 
223 aa  187  9e-47  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  49.3 
 
 
220 aa  187  1e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  45.25 
 
 
230 aa  186  2e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  44.84 
 
 
226 aa  187  2e-46  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  46.09 
 
 
234 aa  186  2e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  50 
 
 
215 aa  186  3e-46  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  46.9 
 
 
229 aa  186  3e-46  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  47.47 
 
 
221 aa  186  4e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  46.12 
 
 
221 aa  185  5e-46  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  46.95 
 
 
217 aa  184  1.0000000000000001e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  47.47 
 
 
217 aa  184  1.0000000000000001e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0601  two component transcriptional regulator, LuxR family  48.6 
 
 
215 aa  184  1.0000000000000001e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  44.74 
 
 
234 aa  184  1.0000000000000001e-45  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_014151  Cfla_0857  two component transcriptional regulator, LuxR family  47.91 
 
 
219 aa  184  1.0000000000000001e-45  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0762303  normal 
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  45.54 
 
 
224 aa  184  1.0000000000000001e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  47.27 
 
 
225 aa  183  2.0000000000000003e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  46.36 
 
 
226 aa  183  2.0000000000000003e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  47.11 
 
 
222 aa  183  2.0000000000000003e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  46.36 
 
 
261 aa  183  2.0000000000000003e-45  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  47.06 
 
 
226 aa  182  3e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  47.56 
 
 
227 aa  182  4.0000000000000006e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  47.22 
 
 
226 aa  182  5.0000000000000004e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  50.46 
 
 
226 aa  182  6e-45  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.46 
 
 
222 aa  182  6e-45  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  40.89 
 
 
250 aa  181  7e-45  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0239  two component transcriptional regulator, LuxR family  45.78 
 
 
230 aa  181  9.000000000000001e-45  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  45.45 
 
 
247 aa  181  1e-44  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  46.54 
 
 
221 aa  181  1e-44  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  46.98 
 
 
215 aa  181  1e-44  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  47.44 
 
 
218 aa  181  1e-44  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013235  Namu_0651  two component transcriptional regulator, LuxR family  46.72 
 
 
241 aa  180  1e-44  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  48.11 
 
 
215 aa  181  1e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  45.66 
 
 
230 aa  181  1e-44  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2689  two component transcriptional regulator, LuxR family  49.06 
 
 
223 aa  181  1e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.364406  normal  0.346923 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  45.45 
 
 
225 aa  179  2e-44  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  45.98 
 
 
225 aa  180  2e-44  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
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