More than 300 homologs were found in PanDaTox collection
for query gene Snas_5262 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_5262  two component transcriptional regulator, LuxR family  100 
 
 
219 aa  423  1e-118  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  70.18 
 
 
226 aa  300  1e-80  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_014210  Ndas_0782  two component transcriptional regulator, LuxR family  73.36 
 
 
220 aa  293  2e-78  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2445  response regulator receiver protein  67.14 
 
 
218 aa  278  5e-74  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0115114  normal  0.02149 
 
 
-
 
NC_014210  Ndas_4254  two component transcriptional regulator, LuxR family  64.49 
 
 
225 aa  265  5e-70  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.867992  normal  0.287586 
 
 
-
 
NC_013093  Amir_3696  two component transcriptional regulator, LuxR family  65.89 
 
 
217 aa  254  6e-67  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  62.44 
 
 
215 aa  253  2.0000000000000002e-66  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4551  two component transcriptional regulator, LuxR family  65.89 
 
 
220 aa  239  2e-62  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_5893  two component transcriptional regulator, LuxR family  52.11 
 
 
218 aa  209  2e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.83 
 
 
222 aa  204  6e-52  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  51.4 
 
 
230 aa  204  6e-52  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  51.38 
 
 
229 aa  197  7e-50  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  52.36 
 
 
215 aa  195  4.0000000000000005e-49  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  55.3 
 
 
221 aa  193  2e-48  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013739  Cwoe_0366  two component transcriptional regulator, LuxR family  52.34 
 
 
220 aa  192  4e-48  Conexibacter woesei DSM 14684  Bacteria  normal  0.0587069  normal  0.203995 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  50.46 
 
 
215 aa  191  6e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  48.87 
 
 
239 aa  187  1e-46  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  48.4 
 
 
221 aa  185  5e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_007333  Tfu_1403  LuxR response regulator receiver  48.83 
 
 
214 aa  184  6e-46  Thermobifida fusca YX  Bacteria  normal  0.676683  n/a   
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  50.68 
 
 
221 aa  185  6e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  49.54 
 
 
217 aa  185  6e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  47.73 
 
 
217 aa  184  7e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  46.73 
 
 
218 aa  184  9e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  46.01 
 
 
218 aa  184  9e-46  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  49.32 
 
 
222 aa  184  9e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  47.73 
 
 
222 aa  184  1.0000000000000001e-45  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  47.71 
 
 
224 aa  184  1.0000000000000001e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013159  Svir_32780  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  50.46 
 
 
216 aa  183  2.0000000000000003e-45  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  49.77 
 
 
214 aa  183  2.0000000000000003e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  48.36 
 
 
226 aa  183  2.0000000000000003e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013093  Amir_0601  two component transcriptional regulator, LuxR family  48.84 
 
 
215 aa  183  2.0000000000000003e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  47.2 
 
 
220 aa  183  2.0000000000000003e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  47.44 
 
 
225 aa  182  4.0000000000000006e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_007333  Tfu_2233  LuxR response regulator receiver  46.33 
 
 
228 aa  181  6e-45  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  43.75 
 
 
219 aa  181  8.000000000000001e-45  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  46.33 
 
 
227 aa  181  8.000000000000001e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  46.73 
 
 
223 aa  181  8.000000000000001e-45  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  46.76 
 
 
224 aa  181  1e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013441  Gbro_2730  response regulator receiver  45.07 
 
 
216 aa  180  1e-44  Gordonia bronchialis DSM 43247  Bacteria  normal  0.776601  n/a   
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  48.37 
 
 
218 aa  180  1e-44  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  47.49 
 
 
219 aa  179  2e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4857  two component transcriptional regulator, LuxR family  45.89 
 
 
234 aa  179  2e-44  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.243741 
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  44.7 
 
 
223 aa  179  2.9999999999999997e-44  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0556432 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  49.77 
 
 
221 aa  179  2.9999999999999997e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  48.21 
 
 
234 aa  179  2.9999999999999997e-44  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  47.47 
 
 
226 aa  178  4.999999999999999e-44  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  46.48 
 
 
220 aa  178  5.999999999999999e-44  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  47.27 
 
 
228 aa  178  7e-44  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013739  Cwoe_5656  two component transcriptional regulator, LuxR family  46.7 
 
 
222 aa  177  8e-44  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2233  two component transcriptional regulator, LuxR family  50.23 
 
 
232 aa  177  9e-44  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00197033  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  46.64 
 
 
227 aa  177  9e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  44.74 
 
 
234 aa  177  1e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  45.79 
 
 
216 aa  177  1e-43  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013947  Snas_3714  two component transcriptional regulator, LuxR family  47.42 
 
 
225 aa  177  1e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.176655 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  47.73 
 
 
230 aa  177  1e-43  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  48.85 
 
 
227 aa  177  1e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  45.41 
 
 
221 aa  177  1e-43  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  45.33 
 
 
241 aa  176  2e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  46.76 
 
 
225 aa  176  2e-43  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  48.36 
 
 
215 aa  176  2e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  44.55 
 
 
225 aa  176  2e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  46.85 
 
 
221 aa  175  4e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  48.85 
 
 
218 aa  175  4e-43  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013093  Amir_2010  two component transcriptional regulator, LuxR family  44.08 
 
 
214 aa  175  5e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  42.06 
 
 
216 aa  175  5e-43  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  47.27 
 
 
230 aa  174  7e-43  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  44.7 
 
 
230 aa  174  7e-43  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  48.61 
 
 
221 aa  174  8e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  42.59 
 
 
222 aa  174  8e-43  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  45.79 
 
 
220 aa  174  8e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  48.86 
 
 
222 aa  174  8e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  45.45 
 
 
219 aa  174  9e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.84 
 
 
236 aa  173  9.999999999999999e-43  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  44.95 
 
 
224 aa  174  9.999999999999999e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  46.61 
 
 
219 aa  173  1.9999999999999998e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  45.16 
 
 
220 aa  173  1.9999999999999998e-42  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  44.86 
 
 
224 aa  172  2.9999999999999996e-42  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013595  Sros_3669  response regulator receiver protein  48.11 
 
 
213 aa  172  2.9999999999999996e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  44.93 
 
 
228 aa  172  2.9999999999999996e-42  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  45.45 
 
 
225 aa  172  2.9999999999999996e-42  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  47.22 
 
 
220 aa  172  2.9999999999999996e-42  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6161  response regulator receiver protein  47.42 
 
 
221 aa  172  2.9999999999999996e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  0.902987  decreased coverage  0.000109123 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  44.7 
 
 
215 aa  172  3.9999999999999995e-42  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_014158  Tpau_1874  two component transcriptional regulator, LuxR family  46.48 
 
 
213 aa  172  3.9999999999999995e-42  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.635222  n/a   
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  44.8 
 
 
228 aa  172  5e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  44.7 
 
 
219 aa  172  5e-42  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  45.12 
 
 
225 aa  171  5.999999999999999e-42  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  43.93 
 
 
221 aa  171  5.999999999999999e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  45.79 
 
 
225 aa  171  6.999999999999999e-42  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013595  Sros_8799  response regulator receiver protein  46.15 
 
 
227 aa  171  6.999999999999999e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  0.755207  normal 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  46.05 
 
 
220 aa  171  6.999999999999999e-42  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1960  two component transcriptional regulator, LuxR family  46.48 
 
 
216 aa  171  6.999999999999999e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  46.61 
 
 
225 aa  171  7.999999999999999e-42  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  50 
 
 
241 aa  171  7.999999999999999e-42  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  43.18 
 
 
233 aa  171  1e-41  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  44.95 
 
 
234 aa  171  1e-41  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  44.95 
 
 
231 aa  171  1e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  44.24 
 
 
234 aa  170  2e-41  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013739  Cwoe_2472  two component transcriptional regulator, LuxR family  43.93 
 
 
221 aa  170  2e-41  Conexibacter woesei DSM 14684  Bacteria  normal  0.0113125  hitchhiker  0.00367669 
 
 
-
 
NC_014210  Ndas_2780  two component transcriptional regulator, LuxR family  46.7 
 
 
219 aa  170  2e-41  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.855193  normal  0.402473 
 
 
-
 
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