| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_25620 |
|---|
| Symbol | |
|---|
| ID | 8634196 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 2846962 |
|---|
| End bp | 2847621 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| Protein accession | YP_003315300 |
|---|
| Protein GI | 269795845 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.263807 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCCGTG TCCTGCTCGT CGACGACGAC CCGCTCGTCC GTCGCTCCCT CCGGCAGATC
CTCGACAGCG ACCCGCGCCT CACCGTCGTG GCCGAGGCCG ACGACGGGGA CGGCGCCGTC
CCCGCCGTGC AGGCGCACCA CCCCGACGTG GTGGTCATGG ACCTGCGCAT GCGGCGCGTC
CACGGCGTCG AGGCGACCGC TGCGGTCCGG CGGCTCCCCG ACCCTCCGGA GGTCGTGGCG
ATGACGAGCT TCGGTGCGGA CGAGCAGGTG CTCCGGGCGC TCGACGCCGG TGCGCGAGGG
TTCCTGCTCA AGGACGCGAC GCCGACCGCG ATCAAGGAGG CCGTGCACGC CGTGGTCGCC
GGTGACGCGT CGCTCTCCCC CGCCGTCGCG CGGTACGTGG TCGACCACGT GACGAGCGAC
CCGCACGGAC CGGCGCGGGC CGCCGCGTCC CGGGAGCTCG ACGGGCTCAC CGACCGTGAG
CGAGCGGTGG CCCTGGGGGT GCACGCCGGC CTCACCAACG ACGAGATCGC GCAGCGCATG
TACGTCAGCG CAGCGACCGT CAAGACCCAC CTGAGCAGCG TCCTCGCCAG GCTCGGCCTC
GAGGGGCGGG TCCAGCTCGC GATCCTCGTC GAGCGGTCGG GTACCGCGGC ACAGGGCTGA
|
|---|
| Protein sequence | MIRVLLVDDD PLVRRSLRQI LDSDPRLTVV AEADDGDGAV PAVQAHHPDV VVMDLRMRRV
HGVEATAAVR RLPDPPEVVA MTSFGADEQV LRALDAGARG FLLKDATPTA IKEAVHAVVA
GDASLSPAVA RYVVDHVTSD PHGPARAAAS RELDGLTDRE RAVALGVHAG LTNDEIAQRM
YVSAATVKTH LSSVLARLGL EGRVQLAILV ERSGTAAQG
|
|---|
| |