Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_1874 |
Symbol | |
ID | 9156024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 1961286 |
End bp | 1961927 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003646826 |
Protein GI | 296139583 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.635222 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGGTCA CCGTGGTCCT GGCCGACGAT CACGCCGCGA TCCGAGCGGG CCTGCGTCTG CTGCTCGAGT CGTCCGGTGA GGTGGAGGTG ATCGGAGAGG CGGCCGACGG GGCCGCCGCC CTGCGGCAGG CGAAGGCGTT GCGGCCCGAT GTGGTGATCA TGGACGTACG GATGCCGCGA GTGGACGGCA TCGCCGCGAC CGCGCATGTG GTGGCGGAGA CCGATGCGGC CGTGCTGGTG CTCACCACCT TCGATCTGGA CGACTACGTC CTGGGCGCGC TCGCGGCGGG AGCGAGCGGC TTCCTGCTCA AGTCCGCGGG CGGCGACGAG CTGATCCGCG GCGTGCAGGC GGTTGCCGCC GGCGATGCGG TGCTCGACCC GAAGGTCACC CGCGCTGTGA TCACCTCCCT GCCTGCGCCA CCGACTGCGG TGCACCCGGA CCTGTCCTCA CTCACCGGCC GGGAGCGAGA TGTATTGGCG GGGCTGGGCG CCGGCCTGTC GAACTATCAG ATCGCACGCC GACTCGAGAT CGGCGAGGCA ACCGTGAAGA CACACGTCTC GCGGGTGCTG ATGAAGCTCG GTGTGCAGTC CCGGGTGCAG GCCGCGGTGA TCGCGGCGCA GTCGGGCCTC GAAGCACCGT GA
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Protein sequence | MTVTVVLADD HAAIRAGLRL LLESSGEVEV IGEAADGAAA LRQAKALRPD VVIMDVRMPR VDGIAATAHV VAETDAAVLV LTTFDLDDYV LGALAAGASG FLLKSAGGDE LIRGVQAVAA GDAVLDPKVT RAVITSLPAP PTAVHPDLSS LTGRERDVLA GLGAGLSNYQ IARRLEIGEA TVKTHVSRVL MKLGVQSRVQ AAVIAAQSGL EAP
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