Gene Ndas_0782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0782 
Symbol 
ID9244627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp962587 
End bp963249 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content74% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003678732 
Protein GI297559758 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCAGGG TGCTGCTCGC CGACGACGAG GCGATGATCC GCGCCGGGGT GCGGGCGATC 
CTGCGCAGCG ACCCGGAGAT CGACGTGGTG GCCGAGGCCG CCGACGGCCG CGAGGCCGTG
GACCTGGTGC TCTCCCACCG CCCCGACGTG GCGCTGCTGG ACATCCGGAT GCCCCGGATG
GACGGCCTCG CCGCCACGGC GGAGATCCGC AGGGTCGCGC CCGGGACCGC CGTGGTCATC
CTCACCACCT TCGGGGAGGA CAGCTACATC TCCCAGGCGC TCGGCGGCGG CGCCAGCGGC
TTCCTGCTCA AGGCGGGCGA CCCGCGCGAG CTGATCGCCG GGGTGCACGC GGTCGCCGAC
GGAGGCGCCT ACCTGTCCCC CCAGGTGGCG CGCCAGGTCA TCGCCCGGTT CGGCGGGCCC
CGGGCCGCCC GGGAAGCGGC GGCCGTCGCC CGGGTCGAGG AGCTCACCCA GCGCGAGCGC
GAGGTGCTGG CCCTGGTGGG GGCGGGCCTG TCCAACGCCG ACATCGCCGA CCGGCTGTTC
CTCGTGGAGG GCACCGTCAA GAGCTACGTC AGCGCCATCC TCAACCGGCT GGAGATGCGC
AACAGGGTCC AGGCGGCCAT CCTCGCCCAC GAGGCCGGAC TCGTGGACAC CTCCGCCACC
TGA
 
Protein sequence
MIRVLLADDE AMIRAGVRAI LRSDPEIDVV AEAADGREAV DLVLSHRPDV ALLDIRMPRM 
DGLAATAEIR RVAPGTAVVI LTTFGEDSYI SQALGGGASG FLLKAGDPRE LIAGVHAVAD
GGAYLSPQVA RQVIARFGGP RAAREAAAVA RVEELTQRER EVLALVGAGL SNADIADRLF
LVEGTVKSYV SAILNRLEMR NRVQAAILAH EAGLVDTSAT