Gene Sked_26900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_26900 
Symbol 
ID8634324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3001186 
End bp3001929 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content72% 
IMG OID 
Productresponse regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
Protein accessionYP_003315428 
Protein GI269795973 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00793239 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.935402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCTCA TGATCAGGAC CCTCATCGTC GACGACGACG CGCTCGTGCG CGCCGGCCTC 
CGCCTCATGC TCGCCGGAGC CCCGGACATC GAGGTCGTCG GGGAGGTCGC CGACGGCTCC
CTCGTGGCCG AGGCCGTCGC CGCCCACCAC CCGGACATCG TCCTCATGGA CATCCGCATG
CCCGTCATGG ACGGGATCGC GGCGACCCAG GCGCTGCGCC AGGGCGCCGC GGCCGCCGGT
GGCTCCAGCG GTGCCGACGG TGGCGACGAC GAGTCCGCCC AGGACTCCGC CCCGCAGGTC
ATCGTGCTCA CCACCTTCGG GGGTGACGAC ACGATCCTCG GTGCGCTCCA GGCCGGTGCC
TCGGGCTACC TGCTCAAGCA CACGCCGCCC GAGGAGATCG TCGACGCCGT CCGCCGGACC
GCCCACGGCG ACCCCGTGCT GTCCCCCGCG GTGATGAAGG TGCTCATCGA CCGGGCGATG
GCGGGTGCTC CCCTGGCGCC GTCGGACACC GCACCTGCCG CGCCGTCACG ATCAGCCCAG
GCTGTCGAGC GCCTCTCCGT GCTGAGCAAC CGCGAGCGCG ACGTGGCGAG CGCCGTCGCG
CAGGGCCTGT CGAACACGGA GATCGCGGAG CAGATGTACC TGTCGATGGG CACCGTGAAG
TCGCACATCT CCAGCGCCCT CACCAAGCTC GACTTCAGCA ACCGCATCCA GCTCGCGCTG
CTCGCCTACG AGGCGGAGCG CTGA
 
Protein sequence
MALMIRTLIV DDDALVRAGL RLMLAGAPDI EVVGEVADGS LVAEAVAAHH PDIVLMDIRM 
PVMDGIAATQ ALRQGAAAAG GSSGADGGDD ESAQDSAPQV IVLTTFGGDD TILGALQAGA
SGYLLKHTPP EEIVDAVRRT AHGDPVLSPA VMKVLIDRAM AGAPLAPSDT APAAPSRSAQ
AVERLSVLSN RERDVASAVA QGLSNTEIAE QMYLSMGTVK SHISSALTKL DFSNRIQLAL
LAYEAER