More than 300 homologs were found in PanDaTox collection
for query gene Jden_2514 on replicon NC_013174
Organism: Jonesia denitrificans DSM 20603



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013174  Jden_2514  two component transcriptional regulator, LuxR family  100 
 
 
230 aa  466  9.999999999999999e-131  Jonesia denitrificans DSM 20603  Bacteria  normal  0.135771  normal  0.887193 
 
 
-
 
NC_014151  Cfla_0822  two component transcriptional regulator, LuxR family  54.84 
 
 
229 aa  228  8e-59  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_2730  response regulator receiver  53.74 
 
 
216 aa  217  2e-55  Gordonia bronchialis DSM 43247  Bacteria  normal  0.776601  n/a   
 
 
-
 
NC_013530  Xcel_0759  two component transcriptional regulator, LuxR family  54.76 
 
 
221 aa  214  9.999999999999999e-55  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.174089  n/a   
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  52.11 
 
 
230 aa  211  5.999999999999999e-54  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013595  Sros_8799  response regulator receiver protein  51.35 
 
 
227 aa  210  2e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.755207  normal 
 
 
-
 
NC_014210  Ndas_4417  two component transcriptional regulator, LuxR family  50.46 
 
 
232 aa  209  2e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_5656  two component transcriptional regulator, LuxR family  50.68 
 
 
222 aa  208  5e-53  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2233  LuxR response regulator receiver  49.54 
 
 
228 aa  206  2e-52  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1318  response regulator receiver  51.83 
 
 
225 aa  207  2e-52  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_2024  two component transcriptional regulator, LuxR family  51.4 
 
 
220 aa  206  2e-52  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.876474  normal 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.77 
 
 
222 aa  206  3e-52  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_013093  Amir_3314  two component transcriptional regulator, LuxR family  49.77 
 
 
222 aa  197  1.0000000000000001e-49  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.00833126  n/a   
 
 
-
 
NC_013595  Sros_4672  response regulator receiver protein  47.89 
 
 
212 aa  196  3e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.223352  normal  0.339353 
 
 
-
 
NC_013757  Gobs_1986  two component transcriptional regulator, LuxR family  51.15 
 
 
226 aa  194  8.000000000000001e-49  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  48.15 
 
 
226 aa  190  1e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_014210  Ndas_1125  two component transcriptional regulator, LuxR family  48.18 
 
 
229 aa  190  1e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.306134 
 
 
-
 
NC_013093  Amir_2010  two component transcriptional regulator, LuxR family  49.06 
 
 
214 aa  189  4e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1403  LuxR response regulator receiver  47.66 
 
 
214 aa  188  5e-47  Thermobifida fusca YX  Bacteria  normal  0.676683  n/a   
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  46.79 
 
 
221 aa  187  1e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_009953  Sare_1603  two component LuxR family transcriptional regulator  52.34 
 
 
245 aa  186  3e-46  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0252513 
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  49.3 
 
 
215 aa  185  5e-46  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_009380  Strop_0395  two component LuxR family transcriptional regulator  50.7 
 
 
217 aa  184  8e-46  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2469  two component transcriptional regulator, LuxR family  48.85 
 
 
229 aa  184  1.0000000000000001e-45  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000889267  n/a   
 
 
-
 
NC_013595  Sros_4219  response regulator receiver protein  48.6 
 
 
217 aa  184  1.0000000000000001e-45  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.0092025  hitchhiker  0.000784643 
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  44.13 
 
 
216 aa  182  3e-45  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  47 
 
 
218 aa  182  4.0000000000000006e-45  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  47 
 
 
220 aa  181  6e-45  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  43.56 
 
 
228 aa  181  1e-44  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  43.58 
 
 
223 aa  180  2e-44  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  44.91 
 
 
215 aa  180  2e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  46.95 
 
 
219 aa  179  2.9999999999999997e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  45.87 
 
 
224 aa  179  2.9999999999999997e-44  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_011884  Cyan7425_3249  two component transcriptional regulator, LuxR family  44.02 
 
 
211 aa  179  4.999999999999999e-44  Cyanothece sp. PCC 7425  Bacteria  normal  0.414819  normal  0.558116 
 
 
-
 
NC_013172  Bfae_02400  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.09 
 
 
255 aa  178  5.999999999999999e-44  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  42.73 
 
 
241 aa  177  9e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  46.3 
 
 
218 aa  177  1e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_014210  Ndas_2780  two component transcriptional regulator, LuxR family  47.91 
 
 
219 aa  177  2e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.855193  normal  0.402473 
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  46.95 
 
 
215 aa  176  2e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_2268  two component LuxR family transcriptional regulator  45.06 
 
 
250 aa  177  2e-43  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.00478344  normal  0.0390494 
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  46.73 
 
 
215 aa  176  2e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  44.6 
 
 
214 aa  176  3e-43  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  46.33 
 
 
222 aa  175  5e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013947  Snas_5068  two component transcriptional regulator, LuxR family  47.91 
 
 
220 aa  175  5e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.708369  normal 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  46.05 
 
 
225 aa  174  9.999999999999999e-43  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  39.58 
 
 
248 aa  174  9.999999999999999e-43  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  45.87 
 
 
225 aa  174  9.999999999999999e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.69 
 
 
225 aa  173  1.9999999999999998e-42  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013595  Sros_3669  response regulator receiver protein  48.6 
 
 
213 aa  173  2.9999999999999996e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  44.2 
 
 
229 aa  172  3.9999999999999995e-42  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  44.13 
 
 
227 aa  172  3.9999999999999995e-42  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013521  Sked_26900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.57 
 
 
247 aa  172  3.9999999999999995e-42  Sanguibacter keddieii DSM 10542  Bacteria  hitchhiker  0.00793239  normal  0.935402 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  42.27 
 
 
224 aa  172  3.9999999999999995e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013093  Amir_2225  two component transcriptional regulator, LuxR family  46.05 
 
 
209 aa  172  3.9999999999999995e-42  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  44.95 
 
 
221 aa  172  5e-42  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  42.6 
 
 
226 aa  172  5e-42  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  44.09 
 
 
227 aa  171  5.999999999999999e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  43.44 
 
 
224 aa  172  5.999999999999999e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  43.26 
 
 
247 aa  171  7.999999999999999e-42  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  45.54 
 
 
241 aa  171  9e-42  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013595  Sros_2445  response regulator receiver protein  44.13 
 
 
218 aa  171  1e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0115114  normal  0.02149 
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  43.38 
 
 
226 aa  170  1e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  44.44 
 
 
217 aa  171  1e-41  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  37.85 
 
 
250 aa  170  2e-41  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0366  two component transcriptional regulator, LuxR family  48.15 
 
 
220 aa  169  2e-41  Conexibacter woesei DSM 14684  Bacteria  normal  0.0587069  normal  0.203995 
 
 
-
 
NC_014210  Ndas_4254  two component transcriptional regulator, LuxR family  42.99 
 
 
225 aa  170  2e-41  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.867992  normal  0.287586 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  44.75 
 
 
226 aa  170  2e-41  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  44.7 
 
 
218 aa  170  2e-41  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_012669  Bcav_2689  two component transcriptional regulator, LuxR family  50.47 
 
 
223 aa  170  2e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.364406  normal  0.346923 
 
 
-
 
NC_013947  Snas_1883  two component transcriptional regulator, LuxR family  49.3 
 
 
215 aa  169  3e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0780809 
 
 
-
 
NC_013510  Tcur_1300  two component transcriptional regulator, LuxR family  46.63 
 
 
215 aa  169  3e-41  Thermomonospora curvata DSM 43183  Bacteria  normal  0.145336  n/a   
 
 
-
 
NC_013947  Snas_5262  two component transcriptional regulator, LuxR family  43.19 
 
 
219 aa  169  3e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1960  two component transcriptional regulator, LuxR family  43.19 
 
 
216 aa  169  3e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  43.44 
 
 
239 aa  169  4e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  42.73 
 
 
222 aa  169  4e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  44.55 
 
 
222 aa  168  6e-41  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  42.33 
 
 
218 aa  168  7e-41  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  43.06 
 
 
216 aa  168  8e-41  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  44.5 
 
 
261 aa  167  8e-41  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_5893  two component transcriptional regulator, LuxR family  43.26 
 
 
218 aa  168  8e-41  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  44.75 
 
 
226 aa  167  9e-41  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  44.09 
 
 
225 aa  167  9e-41  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_009767  Rcas_4227  two component LuxR family transcriptional regulator  45.67 
 
 
213 aa  167  1e-40  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.624898 
 
 
-
 
NC_009972  Haur_4778  two component LuxR family transcriptional regulator  44.13 
 
 
208 aa  167  1e-40  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00000269792  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  43.23 
 
 
224 aa  167  1e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  41.78 
 
 
231 aa  167  1e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  43.36 
 
 
220 aa  166  2e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  42.66 
 
 
225 aa  166  2e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  46.33 
 
 
221 aa  166  2e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  39.45 
 
 
223 aa  166  2.9999999999999998e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  41.92 
 
 
244 aa  166  2.9999999999999998e-40  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  42.2 
 
 
225 aa  166  2.9999999999999998e-40  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013235  Namu_0544  two component transcriptional regulator, LuxR family  42.33 
 
 
215 aa  166  2.9999999999999998e-40  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0782  two component transcriptional regulator, LuxR family  45.07 
 
 
220 aa  166  2.9999999999999998e-40  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_3696  two component transcriptional regulator, LuxR family  44.13 
 
 
217 aa  166  2.9999999999999998e-40  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  41.07 
 
 
233 aa  166  2.9999999999999998e-40  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013947  Snas_3714  two component transcriptional regulator, LuxR family  43.98 
 
 
225 aa  165  4e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.176655 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  41.63 
 
 
239 aa  166  4e-40  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_009972  Haur_2171  two component LuxR family transcriptional regulator  42.23 
 
 
218 aa  166  4e-40  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0762379  n/a   
 
 
-
 
NC_013757  Gobs_4064  two component transcriptional regulator, LuxR family  43.96 
 
 
217 aa  165  5e-40  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
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