Gene Namu_0480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0480 
Symbol 
ID8446063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp530538 
End bp531182 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content72% 
IMG OID645039616 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003199888 
Protein GI258650732 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGTCC GGGTGGTCGT CGTCGACGAC AACGAGCTGC TGCGGGCGGG CCTGGTCACC 
GTGCTGACCA GCGACCCGGA CATCGAGGTC GTCGGGCAGG CCGCCGACGG TCCCGCGGGC
GTGCGTGCGT GCCGTGAGCA CCGACCCGAC TTGGTGCTGA TGGACGTCGA GATGCCCGGC
GGTGACGGCA TCGTCGCGAC CCGGCGGATC GTCACCGACC TGCCCGACGT CCGGGTGCTG
ATCCTGACAA TGTTCGACCT GGACGACTAC GTCGTCGAGG CGTTGCGCGC CGGGGCCGCC
GGGTTCCTGC TCAAGACCAC GCCGCCGCGC GACTTGATCC GGTCGGTGCG CCAGTGCGCG
GCGGGGGAGA CCACCGTCGG TCCGACCGTG ATGGCCCGCC TGGTCGACTC CTACGTCGGG
CACCAGGAAC CGCCGCCGCC GGGCCTGGCC GAGCTGACCG GCCGCGAGCT GGACGTGCTG
CGCTGCCTGG CCGACGGCCG GTCCAACGCC GAGATCGCCG GCGAGTTGTT CCTGGCCGAG
ACCACGGTCA AGACCCACGT TGCGCGAATC CTGGCCAAGC TCGGCGTCCG CGACCGGGTG
CAGGCCGTCG TCATCGCCCA CCGCTGCGGG TTGGCCCGTG GCTGA
 
Protein sequence
MSVRVVVVDD NELLRAGLVT VLTSDPDIEV VGQAADGPAG VRACREHRPD LVLMDVEMPG 
GDGIVATRRI VTDLPDVRVL ILTMFDLDDY VVEALRAGAA GFLLKTTPPR DLIRSVRQCA
AGETTVGPTV MARLVDSYVG HQEPPPPGLA ELTGRELDVL RCLADGRSNA EIAGELFLAE
TTVKTHVARI LAKLGVRDRV QAVVIAHRCG LARG