Gene Tpau_2872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2872 
Symbol 
ID9157040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp2980458 
End bp2981114 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content68% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003647809 
Protein GI296140566 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGATCA CCGTCTTCAT CGCCGACGAT CAGGCCATGG TCCGTCAGGG CTTCGGCGCC 
CTTCTCGGTG CTCAGCCCGA CATCTCCGTG GTCGGTGACG CGCCCGACGG CAGGGCCGCC 
GTCACCGAGG TCGCCCGTCT ACTGCCCGAT GTGGTGCTGA TGGACGTCCG CATGCCCGAG 
ATGAACGGGT TGCAGGCCGC CGAGGAGATT CTGCGTCGGC ACGACGGCGT CCGGGTCCTG 
ATGCTCACCA CGTTCGACAT TGATGACTAC GTCTACGAGG CGTTACGCGT TGGTGCCTCT 
GGTTTCATGC TCAAGGACGC GCCCGCGGAG GAGCTGGTGC GCGCCGTCCG CGTGGTGCAT 
GAGGGCCAGT CGCTGCTGGC TCCGTCGGTA ACCCGACGGA TGATCGCCGA GGTCACCGCG 
GCTCGGTCCC GGCGGCGTCC GGCCCCTGCC GAGCTCGGCA CCCTCACTCC GCGTGAGCGG 
GAAGTGCTCG AAGCCGTGGC GGCGGGCCGG TCCAACGCGG AGATCGCCGA GACTCTGTTC 
GTCTCCGAGC AGACGGTGAA GACCCACGTC AGCAAGGTGC TGCAGAAGCT GGGACTGCGC 
GACCGGGCGC AGGCCGTGGT CTACGCCTAC GAGACGGGTG TTGTCACGCC CGGGTGA
 
Protein sequence
MPITVFIADD QAMVRQGFGA LLGAQPDISV VGDAPDGRAA VTEVARLLPD VVLMDVRMPE 
MNGLQAAEEI LRRHDGVRVL MLTTFDIDDY VYEALRVGAS GFMLKDAPAE ELVRAVRVVH 
EGQSLLAPSV TRRMIAEVTA ARSRRRPAPA ELGTLTPRER EVLEAVAAGR SNAEIAETLF 
VSEQTVKTHV SKVLQKLGLR DRAQAVVYAY ETGVVTPG