More than 300 homologs were found in PanDaTox collection
for query gene Snas_5068 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_5068  two component transcriptional regulator, LuxR family  100 
 
 
220 aa  425  1e-118  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.708369  normal 
 
 
-
 
NC_014210  Ndas_1125  two component transcriptional regulator, LuxR family  64.57 
 
 
229 aa  262  4e-69  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.306134 
 
 
-
 
NC_013521  Sked_26900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.91 
 
 
247 aa  233  2.0000000000000002e-60  Sanguibacter keddieii DSM 10542  Bacteria  hitchhiker  0.00793239  normal  0.935402 
 
 
-
 
NC_007333  Tfu_2233  LuxR response regulator receiver  59.63 
 
 
228 aa  231  9e-60  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5656  two component transcriptional regulator, LuxR family  59.35 
 
 
222 aa  226  2e-58  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8799  response regulator receiver protein  61.11 
 
 
227 aa  225  4e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.755207  normal 
 
 
-
 
NC_008699  Noca_1318  response regulator receiver  56.44 
 
 
225 aa  220  9.999999999999999e-57  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2689  two component transcriptional regulator, LuxR family  60.66 
 
 
223 aa  220  9.999999999999999e-57  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.364406  normal  0.346923 
 
 
-
 
NC_014210  Ndas_2024  two component transcriptional regulator, LuxR family  56.82 
 
 
220 aa  215  4e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.876474  normal 
 
 
-
 
NC_013530  Xcel_0759  two component transcriptional regulator, LuxR family  60.85 
 
 
221 aa  212  4.9999999999999996e-54  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.174089  n/a   
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  51.15 
 
 
230 aa  211  9e-54  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_014210  Ndas_4417  two component transcriptional regulator, LuxR family  56.22 
 
 
232 aa  209  3e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2469  two component transcriptional regulator, LuxR family  54.26 
 
 
229 aa  207  9e-53  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000889267  n/a   
 
 
-
 
NC_009921  Franean1_2268  two component LuxR family transcriptional regulator  53.59 
 
 
250 aa  207  1e-52  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.00478344  normal  0.0390494 
 
 
-
 
NC_013595  Sros_4219  response regulator receiver protein  55.91 
 
 
217 aa  206  2e-52  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.0092025  hitchhiker  0.000784643 
 
 
-
 
NC_013757  Gobs_1986  two component transcriptional regulator, LuxR family  53.64 
 
 
226 aa  202  4e-51  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_0395  two component LuxR family transcriptional regulator  56.68 
 
 
217 aa  200  9.999999999999999e-51  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_2730  response regulator receiver  50.23 
 
 
216 aa  193  2e-48  Gordonia bronchialis DSM 43247  Bacteria  normal  0.776601  n/a   
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.98 
 
 
222 aa  192  4e-48  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_013174  Jden_2514  two component transcriptional regulator, LuxR family  47.91 
 
 
230 aa  191  7e-48  Jonesia denitrificans DSM 20603  Bacteria  normal  0.135771  normal  0.887193 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.88 
 
 
225 aa  189  2.9999999999999997e-47  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  50 
 
 
215 aa  188  5e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_014151  Cfla_0822  two component transcriptional regulator, LuxR family  49.54 
 
 
229 aa  188  5.999999999999999e-47  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  47.47 
 
 
219 aa  188  5.999999999999999e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  46.58 
 
 
228 aa  185  5e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013093  Amir_3314  two component transcriptional regulator, LuxR family  50 
 
 
222 aa  185  6e-46  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.00833126  n/a   
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  53.21 
 
 
241 aa  184  6e-46  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  48.15 
 
 
226 aa  183  1.0000000000000001e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_009953  Sare_1603  two component LuxR family transcriptional regulator  56.48 
 
 
245 aa  182  4.0000000000000006e-45  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0252513 
 
 
-
 
NC_014210  Ndas_2780  two component transcriptional regulator, LuxR family  49.07 
 
 
219 aa  181  6e-45  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.855193  normal  0.402473 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  45.7 
 
 
219 aa  181  7e-45  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  46.15 
 
 
234 aa  181  9.000000000000001e-45  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  51.38 
 
 
222 aa  181  9.000000000000001e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  47.47 
 
 
219 aa  180  2e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6351  two component LuxR family transcriptional regulator  46.05 
 
 
244 aa  180  2e-44  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2010  two component transcriptional regulator, LuxR family  48.6 
 
 
214 aa  179  2e-44  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3669  response regulator receiver protein  49.07 
 
 
213 aa  179  2.9999999999999997e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  45.25 
 
 
220 aa  179  4e-44  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_014151  Cfla_0857  two component transcriptional regulator, LuxR family  47.47 
 
 
219 aa  178  4e-44  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0762303  normal 
 
 
-
 
NC_013093  Amir_5893  two component transcriptional regulator, LuxR family  47.69 
 
 
218 aa  178  5.999999999999999e-44  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  44.44 
 
 
218 aa  178  5.999999999999999e-44  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  46.82 
 
 
226 aa  177  1e-43  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013595  Sros_4672  response regulator receiver protein  47.22 
 
 
212 aa  177  1e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.223352  normal  0.339353 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  46.33 
 
 
224 aa  177  1e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  48.39 
 
 
224 aa  177  2e-43  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013172  Bfae_02400  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.61 
 
 
255 aa  176  3e-43  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  45.93 
 
 
211 aa  176  3e-43  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  46.98 
 
 
222 aa  176  3e-43  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  45.66 
 
 
224 aa  176  3e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  44.5 
 
 
239 aa  175  4e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  46.7 
 
 
218 aa  175  4e-43  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  48.39 
 
 
217 aa  175  5e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013131  Caci_6705  two component transcriptional regulator, LuxR family  44.13 
 
 
258 aa  175  6e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.318103  normal  0.0731204 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  46.3 
 
 
225 aa  174  7e-43  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013947  Snas_1883  two component transcriptional regulator, LuxR family  51.16 
 
 
215 aa  174  8e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0780809 
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  45.83 
 
 
215 aa  174  9.999999999999999e-43  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  48.15 
 
 
220 aa  174  9.999999999999999e-43  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.87 
 
 
226 aa  174  9.999999999999999e-43  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  45.16 
 
 
219 aa  174  9.999999999999999e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  44.75 
 
 
227 aa  173  1.9999999999999998e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  46.85 
 
 
225 aa  173  1.9999999999999998e-42  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013093  Amir_2225  two component transcriptional regulator, LuxR family  50 
 
 
209 aa  173  1.9999999999999998e-42  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  43.78 
 
 
219 aa  172  2.9999999999999996e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  46.64 
 
 
220 aa  172  2.9999999999999996e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  44.95 
 
 
226 aa  171  5.999999999999999e-42  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  45.83 
 
 
226 aa  171  7.999999999999999e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_013595  Sros_6161  response regulator receiver protein  46.3 
 
 
221 aa  171  9e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  0.902987  decreased coverage  0.000109123 
 
 
-
 
NC_013595  Sros_2445  response regulator receiver protein  46.54 
 
 
218 aa  170  2e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0115114  normal  0.02149 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  43.42 
 
 
234 aa  169  3e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  45 
 
 
225 aa  169  3e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  45.37 
 
 
216 aa  169  4e-41  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  46.76 
 
 
218 aa  169  4e-41  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  42.99 
 
 
224 aa  168  6e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013739  Cwoe_0366  two component transcriptional regulator, LuxR family  49.77 
 
 
220 aa  168  7e-41  Conexibacter woesei DSM 14684  Bacteria  normal  0.0587069  normal  0.203995 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  47.95 
 
 
227 aa  167  1e-40  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  46.08 
 
 
223 aa  167  1e-40  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013595  Sros_0609  response regulator receiver protein  41.59 
 
 
218 aa  167  1e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4254  two component transcriptional regulator, LuxR family  42.59 
 
 
225 aa  167  1e-40  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.867992  normal  0.287586 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  45 
 
 
225 aa  166  2e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  45.91 
 
 
225 aa  166  2e-40  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  44.54 
 
 
244 aa  166  2e-40  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  40.45 
 
 
221 aa  166  2e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  43.72 
 
 
225 aa  166  2e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  47.03 
 
 
220 aa  167  2e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  45.25 
 
 
232 aa  166  2e-40  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  43.98 
 
 
239 aa  166  2.9999999999999998e-40  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  47.25 
 
 
229 aa  166  2.9999999999999998e-40  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  42.86 
 
 
228 aa  166  2.9999999999999998e-40  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  45.21 
 
 
228 aa  166  2.9999999999999998e-40  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  44.39 
 
 
218 aa  166  4e-40  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  44.8 
 
 
221 aa  166  4e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  43.24 
 
 
223 aa  165  5e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  41.59 
 
 
244 aa  164  6.9999999999999995e-40  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  44.44 
 
 
220 aa  164  9e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_013947  Snas_1960  two component transcriptional regulator, LuxR family  45.37 
 
 
216 aa  164  1.0000000000000001e-39  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  40.62 
 
 
233 aa  164  1.0000000000000001e-39  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_014210  Ndas_0782  two component transcriptional regulator, LuxR family  44.91 
 
 
220 aa  163  2.0000000000000002e-39  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  44.91 
 
 
225 aa  163  2.0000000000000002e-39  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  43.18 
 
 
225 aa  163  2.0000000000000002e-39  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_013093  Amir_0601  two component transcriptional regulator, LuxR family  48.36 
 
 
215 aa  163  2.0000000000000002e-39  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
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