More than 300 homologs were found in PanDaTox collection
for query gene Ndas_2489 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_2489  two component transcriptional regulator, LuxR family  100 
 
 
226 aa  420  1e-116  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.526711  normal  0.682115 
 
 
-
 
NC_014210  Ndas_1125  two component transcriptional regulator, LuxR family  54.15 
 
 
229 aa  203  2e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.306134 
 
 
-
 
NC_013595  Sros_8799  response regulator receiver protein  53.85 
 
 
227 aa  200  9.999999999999999e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.755207  normal 
 
 
-
 
NC_013739  Cwoe_5656  two component transcriptional regulator, LuxR family  54.46 
 
 
222 aa  199  3e-50  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2233  LuxR response regulator receiver  52.07 
 
 
228 aa  198  3.9999999999999996e-50  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4417  two component transcriptional regulator, LuxR family  55.3 
 
 
232 aa  193  2e-48  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4672  response regulator receiver protein  51.87 
 
 
212 aa  191  9e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.223352  normal  0.339353 
 
 
-
 
NC_009380  Strop_0395  two component LuxR family transcriptional regulator  56.74 
 
 
217 aa  190  1e-47  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_2730  response regulator receiver  51.64 
 
 
216 aa  190  2e-47  Gordonia bronchialis DSM 43247  Bacteria  normal  0.776601  n/a   
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  50.23 
 
 
230 aa  186  2e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_014151  Cfla_0822  two component transcriptional regulator, LuxR family  49.77 
 
 
229 aa  183  2.0000000000000003e-45  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2024  two component transcriptional regulator, LuxR family  51.35 
 
 
220 aa  183  2.0000000000000003e-45  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.876474  normal 
 
 
-
 
NC_008699  Noca_1318  response regulator receiver  50 
 
 
225 aa  179  2e-44  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_3314  two component transcriptional regulator, LuxR family  53.18 
 
 
222 aa  178  4.999999999999999e-44  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.00833126  n/a   
 
 
-
 
NC_013757  Gobs_1986  two component transcriptional regulator, LuxR family  49.77 
 
 
226 aa  179  4.999999999999999e-44  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0759  two component transcriptional regulator, LuxR family  52.86 
 
 
221 aa  177  2e-43  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.174089  n/a   
 
 
-
 
NC_013093  Amir_2010  two component transcriptional regulator, LuxR family  50 
 
 
214 aa  175  6e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1603  two component LuxR family transcriptional regulator  55.35 
 
 
245 aa  174  7e-43  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0252513 
 
 
-
 
NC_013174  Jden_2514  two component transcriptional regulator, LuxR family  46.01 
 
 
230 aa  173  1.9999999999999998e-42  Jonesia denitrificans DSM 20603  Bacteria  normal  0.135771  normal  0.887193 
 
 
-
 
NC_014210  Ndas_2780  two component transcriptional regulator, LuxR family  49.3 
 
 
219 aa  172  2.9999999999999996e-42  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.855193  normal  0.402473 
 
 
-
 
NC_013595  Sros_4219  response regulator receiver protein  50 
 
 
217 aa  168  5e-41  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.0092025  hitchhiker  0.000784643 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  51.01 
 
 
221 aa  167  9e-41  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013947  Snas_5068  two component transcriptional regulator, LuxR family  48.18 
 
 
220 aa  167  1e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.708369  normal 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  46.63 
 
 
231 aa  167  1e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  46.3 
 
 
219 aa  166  2.9999999999999998e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_26900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  42.98 
 
 
247 aa  165  5e-40  Sanguibacter keddieii DSM 10542  Bacteria  hitchhiker  0.00793239  normal  0.935402 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.91 
 
 
222 aa  165  6.9999999999999995e-40  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  46.73 
 
 
215 aa  164  8e-40  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  48.28 
 
 
218 aa  164  1.0000000000000001e-39  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_012669  Bcav_2689  two component transcriptional regulator, LuxR family  53.62 
 
 
223 aa  163  2.0000000000000002e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.364406  normal  0.346923 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  48.36 
 
 
234 aa  162  4.0000000000000004e-39  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013510  Tcur_2469  two component transcriptional regulator, LuxR family  46.64 
 
 
229 aa  162  4.0000000000000004e-39  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000889267  n/a   
 
 
-
 
NC_013947  Snas_1960  two component transcriptional regulator, LuxR family  45.37 
 
 
216 aa  160  2e-38  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4995  two component transcriptional regulator, LuxR family  52.07 
 
 
218 aa  159  3e-38  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3669  response regulator receiver protein  49.53 
 
 
213 aa  159  4e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  47.14 
 
 
225 aa  159  4e-38  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  47.2 
 
 
215 aa  158  8e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  48.78 
 
 
223 aa  157  1e-37  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013595  Sros_6161  response regulator receiver protein  47.03 
 
 
221 aa  157  1e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  0.902987  decreased coverage  0.000109123 
 
 
-
 
NC_009921  Franean1_2268  two component LuxR family transcriptional regulator  46.58 
 
 
250 aa  157  2e-37  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.00478344  normal  0.0390494 
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  48.17 
 
 
239 aa  156  3e-37  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.81 
 
 
236 aa  154  1e-36  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  47.57 
 
 
226 aa  153  2e-36  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  49.04 
 
 
227 aa  152  2.9999999999999998e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  47.5 
 
 
213 aa  152  2.9999999999999998e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  50 
 
 
225 aa  152  4e-36  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_014210  Ndas_4254  two component transcriptional regulator, LuxR family  46.3 
 
 
225 aa  152  4e-36  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.867992  normal  0.287586 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  45.15 
 
 
241 aa  150  1e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.97 
 
 
230 aa  150  1e-35  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013521  Sked_37860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.76 
 
 
221 aa  150  2e-35  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  45.45 
 
 
224 aa  150  2e-35  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  44.29 
 
 
220 aa  149  3e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  47.09 
 
 
226 aa  149  3e-35  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.38 
 
 
229 aa  149  4e-35  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  46.89 
 
 
225 aa  148  6e-35  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  39.82 
 
 
233 aa  148  7e-35  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  47.22 
 
 
249 aa  148  8e-35  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  45.59 
 
 
239 aa  147  1.0000000000000001e-34  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_5893  two component transcriptional regulator, LuxR family  41.59 
 
 
218 aa  147  1.0000000000000001e-34  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  48.77 
 
 
218 aa  147  2.0000000000000003e-34  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  48.78 
 
 
227 aa  146  2.0000000000000003e-34  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  46.83 
 
 
225 aa  146  2.0000000000000003e-34  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  44.34 
 
 
242 aa  146  3e-34  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  45.54 
 
 
215 aa  146  3e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  45.19 
 
 
228 aa  145  4.0000000000000006e-34  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  45.5 
 
 
225 aa  145  5e-34  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  44.29 
 
 
225 aa  145  5e-34  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  43.19 
 
 
224 aa  145  6e-34  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  48.29 
 
 
222 aa  145  7.0000000000000006e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013172  Bfae_02400  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  42.74 
 
 
255 aa  144  1e-33  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  45.81 
 
 
214 aa  144  1e-33  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  47.06 
 
 
216 aa  143  2e-33  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  42.25 
 
 
234 aa  143  2e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  46.7 
 
 
228 aa  143  3e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  45.45 
 
 
218 aa  142  3e-33  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  44.7 
 
 
261 aa  142  3e-33  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  47.06 
 
 
221 aa  143  3e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  46.61 
 
 
220 aa  142  3e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.58 
 
 
225 aa  142  4e-33  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  47.09 
 
 
225 aa  142  4e-33  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000789071 
 
 
-
 
NC_013093  Amir_0601  two component transcriptional regulator, LuxR family  43.2 
 
 
215 aa  142  4e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  46.89 
 
 
222 aa  142  5e-33  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_007404  Tbd_2464  two component LuxR family transcriptional regulator  41.87 
 
 
221 aa  142  5e-33  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  47.62 
 
 
241 aa  142  5e-33  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013521  Sked_25620  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.66 
 
 
219 aa  142  5e-33  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.263807 
 
 
-
 
NC_013947  Snas_1883  two component transcriptional regulator, LuxR family  47.64 
 
 
215 aa  141  7e-33  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0780809 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  43.81 
 
 
228 aa  141  7e-33  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  45.5 
 
 
224 aa  141  7e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  46.6 
 
 
225 aa  141  9e-33  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_009380  Strop_4132  response regulator receiver  44.86 
 
 
235 aa  140  9.999999999999999e-33  Salinispora tropica CNB-440  Bacteria  normal  0.232221  normal 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  44.39 
 
 
227 aa  140  9.999999999999999e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.38 
 
 
226 aa  140  9.999999999999999e-33  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_3507  two component transcriptional regulator, LuxR family  43.2 
 
 
213 aa  140  1.9999999999999998e-32  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.892641  n/a   
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  44.44 
 
 
223 aa  139  1.9999999999999998e-32  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013131  Caci_1616  two component transcriptional regulator, LuxR family  43.27 
 
 
226 aa  139  3e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0231149  normal  0.0629914 
 
 
-
 
NC_014211  Ndas_4872  two component transcriptional regulator, LuxR family  46.82 
 
 
232 aa  139  3e-32  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.247388  normal 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  37.93 
 
 
248 aa  139  3e-32  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  45.59 
 
 
226 aa  139  3.9999999999999997e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  42.59 
 
 
226 aa  139  3.9999999999999997e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  46.97 
 
 
218 aa  139  3.9999999999999997e-32  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
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