Gene Tpau_3507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3507 
Symbol 
ID9157682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp3618890 
End bp3619531 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content71% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003648425 
Protein GI296141182 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.892641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCCGGG TGCTGATCGT CGACGACCAG CGGTTGATCC GCGACAGCCT GCGCATGCTC 
TTCGACGGCG TGGACGACTT CGAGGTGGTG GGCGAGGCGC GCGACGGGCA GCAAGCCGGA 
GACGAGTTCG CCCGCACCCT GCCGGATCTG GTGCTGATGG ACCTGCGGAT GCCCGGCGCC 
GACGGGATCG TGGGGATCGA GCGGATCAAG GCGCAGGACC CGGATGCGGC CGTCGTGGTA 
CTCACCACCT TCGACGACGA CGATCATCTG TATCCCGCGC TGCGGGCCGG GGCCGCGGGC 
TTCCTCGCCA AGGACATCGC CCCCGAGGAC CTGCTGGACG CGGTGCGCCG CACCCTGGCC 
GGCGACGTTC CGCTCTCGCC CGCCACCGTC AAACGACTGA TCGGTCAGGC GCTGGTGGCC 
CGCACGGATG CGCCGGCGCC GGCCGCCGCT CCGGCCGAGT ACTCGTTGAC CGCCCGCGAG 
CGCGAGGTGC TCGCGCTGAT CGGGCAGGGC CTGTCGAACG CCGAGATCGC CGCCGAGCTG 
CACCTGGCGG TGACCACGGT GAAGTCACAC GTGACCAACC TGCTGGCGAA GACCGATTCC 
AGCACCAGGT TGCAGCTGGC CCTGCTCGCC GCTCACGGGT AG
 
Protein sequence
MIRVLIVDDQ RLIRDSLRML FDGVDDFEVV GEARDGQQAG DEFARTLPDL VLMDLRMPGA 
DGIVGIERIK AQDPDAAVVV LTTFDDDDHL YPALRAGAAG FLAKDIAPED LLDAVRRTLA 
GDVPLSPATV KRLIGQALVA RTDAPAPAAA PAEYSLTARE REVLALIGQG LSNAEIAAEL 
HLAVTTVKSH VTNLLAKTDS STRLQLALLA AHG