Gene Tbd_2464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2464 
Symbol 
ID3671783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2537429 
End bp2538094 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content66% 
IMG OID637711170 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_316222 
Protein GI74318482 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGA CCCGCATCAT CCTCGTCGAC GATCACACGC TGTTCCGCAA GGGGCTCGCC 
GAGCTGCTCG AACAGAGCGG CGAAATCGAG GTCACCGCCT TCACGGGCAA CCCCGACGAG
GTCGCGATGC TGCTTAAGGC CCATCGCCCC GACGTCCTCA TCCTCGATCT CAACATGCCC
GGGACCGACG GCATCACGCT GATGCAACAG TTGCGCAACG CGGGCTTCGC GCTGCCGATC
CTGATCCTGA CGCTGTCGGA AACCGAAGAC GACCTCGCGC GCGCGCTACG CGCCGGCGCG
AACGGCTATC TGCTGAAAAG CATGGAACCC GACGAGGTCG TCGACGCGAT CCTGCGCGCG
CAGCGCGGCG AGACCGTCGT CGCGCCCGCG ATGACCGCGA AGCTGGTCAA GCTCTACGAC
CAGAAGGGCC AGGACGCCGG TTCCCTGCTC GACGCGCTGA CCCCGCGCGA ACGCGAGATC
CTCTCGCATC TGTCACGCGG CGAGAGCAAC AAGGCGATCG CGCGCACCCT CGACATCAGC
CACGACACGG TCAAGCTGCA CGTGCGCCAC ATCCTCGCCA AGCTCAATCT GTCGTCGCGC
GTCGAGGCCG CCGTATTCGC GGTCGAACAC AAGGTCGCAC CGGGCAGCCG CAGCGACGGC
CGGTAA
 
Protein sequence
MSLTRIILVD DHTLFRKGLA ELLEQSGEIE VTAFTGNPDE VAMLLKAHRP DVLILDLNMP 
GTDGITLMQQ LRNAGFALPI LILTLSETED DLARALRAGA NGYLLKSMEP DEVVDAILRA
QRGETVVAPA MTAKLVKLYD QKGQDAGSLL DALTPREREI LSHLSRGESN KAIARTLDIS
HDTVKLHVRH ILAKLNLSSR VEAAVFAVEH KVAPGSRSDG R