More than 300 homologs were found in PanDaTox collection
for query gene Bcav_0296 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012669  Bcav_0296  two component transcriptional regulator, LuxR family  100 
 
 
198 aa  373  1e-103  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.1736  normal 
 
 
-
 
NC_014210  Ndas_2024  two component transcriptional regulator, LuxR family  59.9 
 
 
220 aa  205  4e-52  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.876474  normal 
 
 
-
 
NC_007333  Tfu_2233  LuxR response regulator receiver  56.7 
 
 
228 aa  194  6e-49  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4219  response regulator receiver protein  58.85 
 
 
217 aa  194  9e-49  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.0092025  hitchhiker  0.000784643 
 
 
-
 
NC_013595  Sros_8799  response regulator receiver protein  57.22 
 
 
227 aa  192  2e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.755207  normal 
 
 
-
 
NC_013739  Cwoe_5656  two component transcriptional regulator, LuxR family  56.12 
 
 
222 aa  183  1.0000000000000001e-45  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2469  two component transcriptional regulator, LuxR family  55.68 
 
 
229 aa  181  4.0000000000000006e-45  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000889267  n/a   
 
 
-
 
NC_014210  Ndas_4417  two component transcriptional regulator, LuxR family  54.64 
 
 
232 aa  181  8.000000000000001e-45  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_3314  two component transcriptional regulator, LuxR family  54.77 
 
 
222 aa  173  1.9999999999999998e-42  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.00833126  n/a   
 
 
-
 
NC_009380  Strop_0395  two component LuxR family transcriptional regulator  53.33 
 
 
217 aa  169  2e-41  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1125  two component transcriptional regulator, LuxR family  53.5 
 
 
229 aa  166  2e-40  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.306134 
 
 
-
 
NC_009921  Franean1_2268  two component LuxR family transcriptional regulator  49.32 
 
 
250 aa  163  2.0000000000000002e-39  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.00478344  normal  0.0390494 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.91 
 
 
222 aa  162  3e-39  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_013441  Gbro_2730  response regulator receiver  47.15 
 
 
216 aa  160  8.000000000000001e-39  Gordonia bronchialis DSM 43247  Bacteria  normal  0.776601  n/a   
 
 
-
 
NC_013757  Gobs_1986  two component transcriptional regulator, LuxR family  47.24 
 
 
226 aa  159  2e-38  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  51.03 
 
 
230 aa  158  5e-38  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013530  Xcel_0759  two component transcriptional regulator, LuxR family  52.69 
 
 
221 aa  156  2e-37  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.174089  n/a   
 
 
-
 
NC_008699  Noca_1318  response regulator receiver  49.75 
 
 
225 aa  155  3e-37  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1603  two component LuxR family transcriptional regulator  53.33 
 
 
245 aa  155  3e-37  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0252513 
 
 
-
 
NC_013093  Amir_2010  two component transcriptional regulator, LuxR family  50.54 
 
 
214 aa  155  3e-37  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  48.97 
 
 
215 aa  154  6e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_013595  Sros_6161  response regulator receiver protein  51.81 
 
 
221 aa  153  1e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.902987  decreased coverage  0.000109123 
 
 
-
 
NC_013947  Snas_1960  two component transcriptional regulator, LuxR family  47.92 
 
 
216 aa  152  4e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  48.45 
 
 
219 aa  151  5e-36  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0601  two component transcriptional regulator, LuxR family  47.89 
 
 
215 aa  148  6e-35  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_0822  two component transcriptional regulator, LuxR family  47.42 
 
 
229 aa  147  9e-35  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_2514  two component transcriptional regulator, LuxR family  43.08 
 
 
230 aa  147  1.0000000000000001e-34  Jonesia denitrificans DSM 20603  Bacteria  normal  0.135771  normal  0.887193 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  45.74 
 
 
213 aa  146  2.0000000000000003e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  45.69 
 
 
223 aa  145  4.0000000000000006e-34  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013521  Sked_25620  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50 
 
 
219 aa  145  6e-34  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.263807 
 
 
-
 
NC_013739  Cwoe_0366  two component transcriptional regulator, LuxR family  51.79 
 
 
220 aa  143  2e-33  Conexibacter woesei DSM 14684  Bacteria  normal  0.0587069  normal  0.203995 
 
 
-
 
NC_013947  Snas_5068  two component transcriptional regulator, LuxR family  51.27 
 
 
220 aa  143  2e-33  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.708369  normal 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  51.05 
 
 
241 aa  142  4e-33  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  47.47 
 
 
225 aa  142  4e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_26900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  41.7 
 
 
247 aa  142  5e-33  Sanguibacter keddieii DSM 10542  Bacteria  hitchhiker  0.00793239  normal  0.935402 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.73 
 
 
230 aa  142  5e-33  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013947  Snas_1883  two component transcriptional regulator, LuxR family  50 
 
 
215 aa  141  7e-33  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0780809 
 
 
-
 
NC_013595  Sros_4672  response regulator receiver protein  46.11 
 
 
212 aa  140  8e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.223352  normal  0.339353 
 
 
-
 
NC_013595  Sros_2445  response regulator receiver protein  48.45 
 
 
218 aa  140  9.999999999999999e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0115114  normal  0.02149 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  47.45 
 
 
224 aa  140  1.9999999999999998e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2689  two component transcriptional regulator, LuxR family  50.52 
 
 
223 aa  139  1.9999999999999998e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.364406  normal  0.346923 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  46.6 
 
 
217 aa  139  3e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  44.27 
 
 
225 aa  138  4.999999999999999e-32  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013093  Amir_5893  two component transcriptional regulator, LuxR family  46.11 
 
 
218 aa  137  8.999999999999999e-32  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  45.96 
 
 
226 aa  137  1e-31  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  44.27 
 
 
239 aa  137  1e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.81 
 
 
229 aa  137  1e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013159  Svir_32780  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  48.44 
 
 
216 aa  137  1e-31  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  45.31 
 
 
213 aa  136  2e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4995  two component transcriptional regulator, LuxR family  50.78 
 
 
218 aa  135  3.0000000000000003e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  45.5 
 
 
220 aa  135  4e-31  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2225  two component transcriptional regulator, LuxR family  49.5 
 
 
209 aa  135  5e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  40.21 
 
 
219 aa  134  8e-31  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_013947  Snas_3714  two component transcriptional regulator, LuxR family  43.94 
 
 
225 aa  134  9e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.176655 
 
 
-
 
NC_013595  Sros_3998  response regulator receiver protein  46.35 
 
 
233 aa  133  9.999999999999999e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  0.363745  normal  0.263649 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  44.67 
 
 
227 aa  133  9.999999999999999e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  44.04 
 
 
225 aa  133  1.9999999999999998e-30  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_014158  Tpau_1410  two component transcriptional regulator, LuxR family  45.25 
 
 
222 aa  132  1.9999999999999998e-30  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.46664  n/a   
 
 
-
 
NC_013093  Amir_4001  two component transcriptional regulator, LuxR family  47.45 
 
 
217 aa  132  3e-30  Actinosynnema mirum DSM 43827  Bacteria  normal  0.380782  n/a   
 
 
-
 
NC_014210  Ndas_4254  two component transcriptional regulator, LuxR family  42.86 
 
 
225 aa  132  3e-30  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.867992  normal  0.287586 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  43.78 
 
 
230 aa  132  3e-30  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5262  two component transcriptional regulator, LuxR family  42.63 
 
 
219 aa  132  3e-30  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  47.57 
 
 
225 aa  132  3e-30  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  44.28 
 
 
234 aa  132  3.9999999999999996e-30  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013595  Sros_8800  response regulator receiver protein  44.33 
 
 
215 aa  132  3.9999999999999996e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  0.752334  normal 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  42.56 
 
 
224 aa  132  3.9999999999999996e-30  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  41.12 
 
 
221 aa  132  3.9999999999999996e-30  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  45.6 
 
 
214 aa  131  6e-30  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013595  Sros_3669  response regulator receiver protein  45.6 
 
 
213 aa  131  6.999999999999999e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  43.46 
 
 
217 aa  131  6.999999999999999e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  41.33 
 
 
231 aa  131  6.999999999999999e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013235  Namu_0544  two component transcriptional regulator, LuxR family  45.36 
 
 
215 aa  131  7.999999999999999e-30  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3324  two component transcriptional regulator, LuxR family  45.18 
 
 
219 aa  130  9e-30  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0107044  normal  0.345616 
 
 
-
 
NC_013947  Snas_3676  two component transcriptional regulator, LuxR family  44.75 
 
 
214 aa  130  1.0000000000000001e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0625047  normal  0.0780809 
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  44.1 
 
 
226 aa  130  1.0000000000000001e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_013169  Ksed_06250  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.81 
 
 
228 aa  130  1.0000000000000001e-29  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  42.27 
 
 
230 aa  130  1.0000000000000001e-29  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  44.57 
 
 
226 aa  130  1.0000000000000001e-29  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_011884  Cyan7425_3249  two component transcriptional regulator, LuxR family  39.13 
 
 
211 aa  130  1.0000000000000001e-29  Cyanothece sp. PCC 7425  Bacteria  normal  0.414819  normal  0.558116 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  43.59 
 
 
221 aa  130  1.0000000000000001e-29  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  43.2 
 
 
221 aa  130  1.0000000000000001e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  44.32 
 
 
218 aa  129  2.0000000000000002e-29  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_00210  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  43.48 
 
 
221 aa  130  2.0000000000000002e-29  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.133182 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  41.38 
 
 
241 aa  129  2.0000000000000002e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_014210  Ndas_2489  two component transcriptional regulator, LuxR family  47.59 
 
 
226 aa  129  2.0000000000000002e-29  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.526711  normal  0.682115 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  41.58 
 
 
226 aa  129  2.0000000000000002e-29  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  43.01 
 
 
215 aa  129  3e-29  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_009921  Franean1_6351  two component LuxR family transcriptional regulator  43.52 
 
 
244 aa  129  4.0000000000000003e-29  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4857  two component transcriptional regulator, LuxR family  41.71 
 
 
234 aa  128  5.0000000000000004e-29  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.243741 
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  45.41 
 
 
222 aa  128  6e-29  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  41.67 
 
 
215 aa  128  6e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  43.52 
 
 
218 aa  128  7.000000000000001e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  41.45 
 
 
226 aa  127  8.000000000000001e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_014210  Ndas_0782  two component transcriptional regulator, LuxR family  46.24 
 
 
220 aa  127  8.000000000000001e-29  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_0648  two component transcriptional regulator, LuxR family  45.45 
 
 
211 aa  127  8.000000000000001e-29  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0377209  hitchhiker  0.00104431 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  38 
 
 
236 aa  127  8.000000000000001e-29  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  43.07 
 
 
224 aa  127  9.000000000000001e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013510  Tcur_2233  two component transcriptional regulator, LuxR family  46.08 
 
 
232 aa  127  9.000000000000001e-29  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00197033  n/a   
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  41.97 
 
 
224 aa  127  1.0000000000000001e-28  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  44.22 
 
 
222 aa  127  1.0000000000000001e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
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