Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_00210 |
Symbol | |
ID | 8385359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 18624 |
End bp | 19289 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644974125 |
Product | response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein |
Protein accession | YP_003131938 |
Protein GI | 257054106 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.133182 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGGG AACCGATCCG AGTACTCGTC GTCGACGACC AGCAGCTGGT GCGCGAAGGA CTCACGGCGT TACTGGAGCT GACCGAGGAT GTCGAGGTCG TCGGCCAGGC CGCCCATGGA CGGGAAGCCC TCGACATCCT GACCCGGAAG CCCTGCGACG TCGTCCTGAT GGACCTGCGC ATGCCCGTGC TCGACGGCGT CGCCGCGACC CGCGAAATCC GCAATCGCCA CCCGGAAGTA GCGGTGCTCG TACTGACGAC GTACTCCGAC GACGACTCGA TCCGCGACGC TCTCGGGGCC GGCGCACAGG GCTACTTGAC GAAGGATGCC GGTCGCGCGG AGATCCACGC GGCGCTGCGG GCGGCGGTGA CGGGCCAAGC GACGTTCACC ACCGCCGTGT CACGACGGCT GGTGACAGCG CTGACCGAAC AACGGCCTCG GCCCTCGGAA CCCACGCCCG ACCCGAGTGC GACGACGCTC ACCGCCAGGG AACGCGAAAT CCTCGGTCTC ATCGGCGCGG GACTGAGCAA CGCCGAAATC GCCGCGCGGC TCTTCATCGC CGAAAGCACG GTGAAAACCC ACATCAACAA CGCGTTCGCC AAGATCGGTG TACGTAATCG CGCCGGCGCC GTACGGTACG CCTACCAAAC CGGCCTGGTG CGCTGA
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Protein sequence | MNGEPIRVLV VDDQQLVREG LTALLELTED VEVVGQAAHG REALDILTRK PCDVVLMDLR MPVLDGVAAT REIRNRHPEV AVLVLTTYSD DDSIRDALGA GAQGYLTKDA GRAEIHAALR AAVTGQATFT TAVSRRLVTA LTEQRPRPSE PTPDPSATTL TAREREILGL IGAGLSNAEI AARLFIAEST VKTHINNAFA KIGVRNRAGA VRYAYQTGLV R
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