Gene Tpau_1410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1410 
Symbol 
ID9155558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp1477100 
End bp1477768 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content69% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003646377 
Protein GI296139134 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.46664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACG AACCGATCCG CCTGCTGCTC GTGGACGATC AGGACTTAGT GCGGGTGGGC 
TTGCGCCGAA TCCTGCGCCG CCGAGACGGA TTCGAGGTGG TCGGCGAGTG CGCGGACGGC 
GACGAGGTAC CCGCCGCGGT CGCCGAAAGC CGGCCCGACG TGGTTCTGAT GGACCTACGG 
ATGAAACGGG TCAGCGGCAT GGAGGCCACC CGGCGGCTCG GCGAACGGAC CGATGCGCCG 
CCTGTGCTGG TGCTCACCAC GTTCCGCGAC GATGACCTGC TCTCCGCCGC ACTCCGGGCT 
GGAGTGGCGG GGTTCGTACT CAAGGACTCC CCGGCCGAAG AGTTGATTCG CGCGGTGCGA 
CTGGTAGCCG CGGGCGAGGC CGTGCTCGAC CCCGCGGTCA CAGGGCGGGT CTTGCAGACG 
TACCGGGCCG CGCGCCAACC CGCGACCACC CGGGCAGGGG CTGTGGACCC GCTGACCGCA 
CGCGAGGTCG ACGTACTGGG ACTGGTCGGC CGGGGCCTGT CGAACGACGA CATCGCCGCG 
GAGCTCGTGA TCTCGATCGT GACCGTCAAG AGTCACATCG GATCGATCTT CACCAAGCTC 
GGCGTCCGCA ACCGCGCCGA GGCCATCGTG TGGGCGTTCG ACAACGGCGT GGTTGCGCCG 
CGAGCCTGA
 
Protein sequence
MTDEPIRLLL VDDQDLVRVG LRRILRRRDG FEVVGECADG DEVPAAVAES RPDVVLMDLR 
MKRVSGMEAT RRLGERTDAP PVLVLTTFRD DDLLSAALRA GVAGFVLKDS PAEELIRAVR 
LVAAGEAVLD PAVTGRVLQT YRAARQPATT RAGAVDPLTA REVDVLGLVG RGLSNDDIAA 
ELVISIVTVK SHIGSIFTKL GVRNRAEAIV WAFDNGVVAP RA