Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4857 |
Symbol | |
ID | 9248743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 5758082 |
End bp | 5758786 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003682746 |
Protein GI | 297563772 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.243741 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCCGGG TCCTGCTCGT GGACGACCAA CCCCTCGTCC GCACCGGGGT GCGCGCGCTG CTGGAGCGCG ACGAGGGGAT CGAGGTGGTG GCCGAGTCCC AGAACGGCCG CGAGGCGCTC GTGGACATCG ACCGCCACCG CCCCGACGTG GTCCTGCTCG ACCTCCAGAT GCCCGTGATG GACGGCCTGG CGGTGCTCCG CGAGCTGGGA CGCCGCGGCG GCCCCGCGCC CGGGAGGTCC ACAAACGCAC ATGTCGACAC GTCGACGGAC CACGGGGTCC GGGTGGTCGT GCTCACCACG TTCGGCGAGG ACGACAACGT GTTCACCGCG CTGCGGCTGG GCGCCTCCGG CTTCCTGCTC AAGGACGCTG GTCCGCGGCA GTTGCGGGAC GCGGTCCGCA CCGTGGCGGC GGGGGACGCC CTGCTCTCGC CGGGGGTCAC CCGCAGGGTG ATCGAGCGCC TCGCCGACAC CGCGGTCGCC CCCGGTAGCG CCTCCCGGCT GGACGTGCTC ACCGGCCGGG AGCGCGACGT GCTCGCGCTG GTCGGACGCG GTATGTCGAA CCAGGAGATC GGCGCCGCGC TCCACCTGAG CCCGGCGACC GCGCGCACCC ACGTGGGGCG CCTCCTGGCC AAGCTCGGAG TCCGCGACCG GGTCGGCCTG GTGGTGGTCG CCTACGAGAC GGGCCTGGTC CGCCCGGGCC GGTGA
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Protein sequence | MIRVLLVDDQ PLVRTGVRAL LERDEGIEVV AESQNGREAL VDIDRHRPDV VLLDLQMPVM DGLAVLRELG RRGGPAPGRS TNAHVDTSTD HGVRVVVLTT FGEDDNVFTA LRLGASGFLL KDAGPRQLRD AVRTVAAGDA LLSPGVTRRV IERLADTAVA PGSASRLDVL TGRERDVLAL VGRGMSNQEI GAALHLSPAT ARTHVGRLLA KLGVRDRVGL VVVAYETGLV RPGR
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