Gene Ndas_4857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4857 
Symbol 
ID9248743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5758082 
End bp5758786 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content74% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003682746 
Protein GI297563772 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.243741 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCGGG TCCTGCTCGT GGACGACCAA CCCCTCGTCC GCACCGGGGT GCGCGCGCTG 
CTGGAGCGCG ACGAGGGGAT CGAGGTGGTG GCCGAGTCCC AGAACGGCCG CGAGGCGCTC
GTGGACATCG ACCGCCACCG CCCCGACGTG GTCCTGCTCG ACCTCCAGAT GCCCGTGATG
GACGGCCTGG CGGTGCTCCG CGAGCTGGGA CGCCGCGGCG GCCCCGCGCC CGGGAGGTCC
ACAAACGCAC ATGTCGACAC GTCGACGGAC CACGGGGTCC GGGTGGTCGT GCTCACCACG
TTCGGCGAGG ACGACAACGT GTTCACCGCG CTGCGGCTGG GCGCCTCCGG CTTCCTGCTC
AAGGACGCTG GTCCGCGGCA GTTGCGGGAC GCGGTCCGCA CCGTGGCGGC GGGGGACGCC
CTGCTCTCGC CGGGGGTCAC CCGCAGGGTG ATCGAGCGCC TCGCCGACAC CGCGGTCGCC
CCCGGTAGCG CCTCCCGGCT GGACGTGCTC ACCGGCCGGG AGCGCGACGT GCTCGCGCTG
GTCGGACGCG GTATGTCGAA CCAGGAGATC GGCGCCGCGC TCCACCTGAG CCCGGCGACC
GCGCGCACCC ACGTGGGGCG CCTCCTGGCC AAGCTCGGAG TCCGCGACCG GGTCGGCCTG
GTGGTGGTCG CCTACGAGAC GGGCCTGGTC CGCCCGGGCC GGTGA
 
Protein sequence
MIRVLLVDDQ PLVRTGVRAL LERDEGIEVV AESQNGREAL VDIDRHRPDV VLLDLQMPVM 
DGLAVLRELG RRGGPAPGRS TNAHVDTSTD HGVRVVVLTT FGEDDNVFTA LRLGASGFLL
KDAGPRQLRD AVRTVAAGDA LLSPGVTRRV IERLADTAVA PGSASRLDVL TGRERDVLAL
VGRGMSNQEI GAALHLSPAT ARTHVGRLLA KLGVRDRVGL VVVAYETGLV RPGR