More than 300 homologs were found in PanDaTox collection
for query gene Ndas_4857 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_4857  two component transcriptional regulator, LuxR family  100 
 
 
234 aa  444  1.0000000000000001e-124  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.243741 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  55.36 
 
 
224 aa  224  1e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  52.79 
 
 
215 aa  218  5e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  50.64 
 
 
234 aa  208  6e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  48.5 
 
 
225 aa  207  9e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  53.65 
 
 
222 aa  207  1e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  52.59 
 
 
218 aa  207  1e-52  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  52.77 
 
 
219 aa  206  2e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  51.93 
 
 
222 aa  205  4e-52  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  55.36 
 
 
221 aa  204  1e-51  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  51.5 
 
 
221 aa  204  1e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  50.64 
 
 
221 aa  204  1e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  55.51 
 
 
222 aa  203  2e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  51.74 
 
 
217 aa  202  5e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  51.08 
 
 
230 aa  200  9.999999999999999e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  48.94 
 
 
225 aa  201  9.999999999999999e-51  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013947  Snas_5265  two component transcriptional regulator, LuxR family  51.29 
 
 
218 aa  199  1.9999999999999998e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  50.21 
 
 
225 aa  200  1.9999999999999998e-50  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  47.64 
 
 
233 aa  199  3e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  51.29 
 
 
239 aa  199  3e-50  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  51.07 
 
 
228 aa  197  1.0000000000000001e-49  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  50 
 
 
218 aa  196  3e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.48 
 
 
236 aa  196  3e-49  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  51.05 
 
 
224 aa  195  5.000000000000001e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  47.7 
 
 
241 aa  194  8.000000000000001e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  48.33 
 
 
226 aa  194  1e-48  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  49.36 
 
 
227 aa  193  2e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  51.07 
 
 
225 aa  193  2e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_009921  Franean1_6511  two component LuxR family transcriptional regulator  51.53 
 
 
215 aa  193  2e-48  Frankia sp. EAN1pec  Bacteria  normal  normal  0.100644 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  48.94 
 
 
221 aa  193  2e-48  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  48.5 
 
 
221 aa  193  2e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  51.69 
 
 
227 aa  193  2e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  49.79 
 
 
225 aa  192  3e-48  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  49.39 
 
 
244 aa  192  4e-48  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  48.07 
 
 
220 aa  192  5e-48  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.88 
 
 
229 aa  192  5e-48  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  48.93 
 
 
224 aa  192  5e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  47.88 
 
 
231 aa  192  5e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  47.41 
 
 
225 aa  191  6e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  51.5 
 
 
217 aa  191  1e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  49.15 
 
 
220 aa  190  1e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  47.28 
 
 
228 aa  190  1e-47  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  48.95 
 
 
226 aa  189  2.9999999999999997e-47  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  48.07 
 
 
225 aa  189  2.9999999999999997e-47  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  49.35 
 
 
218 aa  189  4e-47  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  48.09 
 
 
224 aa  189  4e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  50.22 
 
 
214 aa  188  8e-47  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  48.54 
 
 
247 aa  187  1e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  48.28 
 
 
226 aa  187  1e-46  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  49.57 
 
 
220 aa  187  2e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_007777  Francci3_0303  two component LuxR family transcriptional regulator  50.43 
 
 
214 aa  186  2e-46  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  50.43 
 
 
226 aa  186  2e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  47.21 
 
 
226 aa  186  2e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  47.28 
 
 
223 aa  186  2e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  49.17 
 
 
229 aa  186  3e-46  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  47.68 
 
 
226 aa  186  3e-46  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  49.79 
 
 
230 aa  186  3e-46  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  50.42 
 
 
224 aa  186  3e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  47.48 
 
 
223 aa  186  3e-46  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000386408  hitchhiker  0.000570848 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  48.47 
 
 
234 aa  185  4e-46  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  47.01 
 
 
261 aa  185  4e-46  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  51.07 
 
 
216 aa  186  4e-46  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  46.15 
 
 
220 aa  186  4e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_013093  Amir_4511  two component transcriptional regulator, LuxR family  48.5 
 
 
226 aa  185  5e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  0.11054  n/a   
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  46.44 
 
 
227 aa  185  5e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  47.26 
 
 
242 aa  184  7e-46  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  46.84 
 
 
223 aa  184  1.0000000000000001e-45  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  47.26 
 
 
223 aa  184  1.0000000000000001e-45  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  50.21 
 
 
222 aa  184  1.0000000000000001e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_009921  Franean1_1652  two component LuxR family transcriptional regulator  50.65 
 
 
217 aa  183  2.0000000000000003e-45  Frankia sp. EAN1pec  Bacteria  normal  0.495895  normal  0.106337 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  46.98 
 
 
239 aa  182  4.0000000000000006e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  48.52 
 
 
241 aa  182  5.0000000000000004e-45  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  47.33 
 
 
232 aa  182  5.0000000000000004e-45  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  48.09 
 
 
224 aa  182  6e-45  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  47.62 
 
 
215 aa  181  7e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  45.26 
 
 
220 aa  181  7e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013947  Snas_1509  two component transcriptional regulator, LuxR family  46.41 
 
 
221 aa  181  7e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.198395  normal  0.0597777 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  45.34 
 
 
225 aa  181  8.000000000000001e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  51.3 
 
 
221 aa  181  9.000000000000001e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  48.07 
 
 
230 aa  181  1e-44  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_4132  response regulator receiver  47.83 
 
 
235 aa  180  1e-44  Salinispora tropica CNB-440  Bacteria  normal  0.232221  normal 
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  47.23 
 
 
219 aa  181  1e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  48.76 
 
 
234 aa  181  1e-44  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  43.28 
 
 
233 aa  181  1e-44  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  48.31 
 
 
225 aa  179  2e-44  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_009921  Franean1_3727  two component LuxR family transcriptional regulator  46.58 
 
 
226 aa  180  2e-44  Frankia sp. EAN1pec  Bacteria  normal  normal  0.554715 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  47.26 
 
 
230 aa  180  2e-44  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  49.57 
 
 
226 aa  180  2e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  47.46 
 
 
215 aa  179  2e-44  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  46.81 
 
 
234 aa  179  2.9999999999999997e-44  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  47.41 
 
 
220 aa  179  2.9999999999999997e-44  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5262  two component transcriptional regulator, LuxR family  45.89 
 
 
219 aa  179  2.9999999999999997e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3669  response regulator receiver protein  46.75 
 
 
213 aa  179  4e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  47.5 
 
 
226 aa  179  4e-44  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  46.19 
 
 
226 aa  179  4e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_012669  Bcav_2710  two component transcriptional regulator, LuxR family  50.64 
 
 
230 aa  179  4e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.248821  normal  0.606697 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  48.29 
 
 
220 aa  179  4.999999999999999e-44  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  46.32 
 
 
217 aa  179  4.999999999999999e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.26 
 
 
225 aa  178  5.999999999999999e-44  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  48.91 
 
 
228 aa  178  5.999999999999999e-44  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
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