Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1509 |
Symbol | |
ID | 8882697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 1594093 |
End bp | 1594758 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003510306 |
Protein GI | 291299028 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.198395 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0597777 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCGA TCCGGCTGGT GGTCGCCGAC GACCAGAAGC TCATCCGGAT GGCACTGTCC ACTCTGGCCG CCGGCGAACC GGACATCGAG CTGGTGGCCG AGGCCGCCGA CGGCAAGGCC GCGCTGACGG CGATCCGGGA CCACAGCCCC GACGTACTGC TGCTCGACAT CCGGATGCCG ATCATGGGTG GCCTGGAAGT GTTGCGCCAC ATCGAGACCG ACCCCGACGC GACCGTACGG GTGATCATGA TGACCACCTT CGACATCGAC CAGTACGTCT TCGAGTCGCT GGAACACGGG GCCGCGGGCT TCCTCACCAA GGACACCGAT CCGGAGTTCA TCCTGCACGC GGTGCGGGTG GTGGCGGCGG GCGAGTCGCT GCTGTCGCCG GGCGTGACCC GCAGGGTCAT CGACCGGTTC ACCCGGGGCC GTCACGCCCG GACCGGCGAA CCGCACCCGG GGCTGGACTC CCTGACCGCC AGGGAGACCG AGATCCTCGG CTGGGTCGCC ACCGGCCTGT CCAACGACGA GATCGCCGAA CGCCTGGTCG TCAGCCCCGC CACCGTGCGC ACCCATGTCG GCCGGGCCAT GATGAAACTG CGGGCCCGCG ACCGCGCCCA GCTCGTCGTC ATCGCCTATC GCTCCGACAT AGACATACCC GAGTAG
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Protein sequence | MNPIRLVVAD DQKLIRMALS TLAAGEPDIE LVAEAADGKA ALTAIRDHSP DVLLLDIRMP IMGGLEVLRH IETDPDATVR VIMMTTFDID QYVFESLEHG AAGFLTKDTD PEFILHAVRV VAAGESLLSP GVTRRVIDRF TRGRHARTGE PHPGLDSLTA RETEILGWVA TGLSNDEIAE RLVVSPATVR THVGRAMMKL RARDRAQLVV IAYRSDIDIP E
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