Gene Snas_1509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1509 
Symbol 
ID8882697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1594093 
End bp1594758 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content69% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003510306 
Protein GI291299028 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.198395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0597777 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGA TCCGGCTGGT GGTCGCCGAC GACCAGAAGC TCATCCGGAT GGCACTGTCC 
ACTCTGGCCG CCGGCGAACC GGACATCGAG CTGGTGGCCG AGGCCGCCGA CGGCAAGGCC
GCGCTGACGG CGATCCGGGA CCACAGCCCC GACGTACTGC TGCTCGACAT CCGGATGCCG
ATCATGGGTG GCCTGGAAGT GTTGCGCCAC ATCGAGACCG ACCCCGACGC GACCGTACGG
GTGATCATGA TGACCACCTT CGACATCGAC CAGTACGTCT TCGAGTCGCT GGAACACGGG
GCCGCGGGCT TCCTCACCAA GGACACCGAT CCGGAGTTCA TCCTGCACGC GGTGCGGGTG
GTGGCGGCGG GCGAGTCGCT GCTGTCGCCG GGCGTGACCC GCAGGGTCAT CGACCGGTTC
ACCCGGGGCC GTCACGCCCG GACCGGCGAA CCGCACCCGG GGCTGGACTC CCTGACCGCC
AGGGAGACCG AGATCCTCGG CTGGGTCGCC ACCGGCCTGT CCAACGACGA GATCGCCGAA
CGCCTGGTCG TCAGCCCCGC CACCGTGCGC ACCCATGTCG GCCGGGCCAT GATGAAACTG
CGGGCCCGCG ACCGCGCCCA GCTCGTCGTC ATCGCCTATC GCTCCGACAT AGACATACCC
GAGTAG
 
Protein sequence
MNPIRLVVAD DQKLIRMALS TLAAGEPDIE LVAEAADGKA ALTAIRDHSP DVLLLDIRMP 
IMGGLEVLRH IETDPDATVR VIMMTTFDID QYVFESLEHG AAGFLTKDTD PEFILHAVRV
VAAGESLLSP GVTRRVIDRF TRGRHARTGE PHPGLDSLTA RETEILGWVA TGLSNDEIAE
RLVVSPATVR THVGRAMMKL RARDRAQLVV IAYRSDIDIP E