More than 300 homologs were found in PanDaTox collection
for query gene Dvul_0670 on replicon NC_008751
Organism: Desulfovibrio vulgaris DP4



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008751  Dvul_0670  two component LuxR family transcriptional regulator  100 
 
 		 216 aa  431  1e-120  Desulfovibrio vulgaris DP4  Bacteria  normal  0.267154  normal  1 
 
 
-
 
NC_011769  DvMF_1021  two component transcriptional regulator, LuxR family  83.18 
 
 		 216 aa  355  2.9999999999999997e-97  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.794365 
 
 
-
 
NC_007519  Dde_2674  two component LuxR family transcriptional regulator  61.86 
 
 		 215 aa  260  1e-68  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.721789  n/a   
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  48.57 
 
 		 218 aa  204  1e-51  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  43.33 
 
 		 223 aa  185  6e-46  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_007974  Rmet_4715  Two component LuxR family transcriptional regulator  42.65 
 
 		 264 aa  171  1e-41  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  46.73 
 
 		 216 aa  169  3e-41  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_1700  two component LuxR family transcriptional regulator  38.68 
 
 		 213 aa  161  6e-39  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.226192 
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  40.57 
 
 		 212 aa  156  3e-37  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_009457  VC0395_A0896  LuxR family transcriptional regulator  41.71 
 
 		 216 aa  155  4e-37  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  39.52 
 
 		 212 aa  154  9e-37  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_0641  two component transcriptional regulator, LuxR family  40.09 
 
 		 1648 aa  154  9e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  37.04 
 
 		 232 aa  153  2e-36  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010465  YPK_3919  two component LuxR family transcriptional regulator  37.85 
 
 		 210 aa  152  2.9999999999999998e-36  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_009708  YpsIP31758_3833  putative DNA-binding response regulator EsrB  37.85 
 
 		 210 aa  152  2.9999999999999998e-36  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  39.72 
 
 		 228 aa  152  2.9999999999999998e-36  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010159  YpAngola_A3945  putative DNA-binding response regulator EsrB  37.85 
 
 		 210 aa  152  4e-36  Yersinia pestis Angola  Bacteria  normal  0.0480381  normal  1 
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  37.5 
 
 		 232 aa  152  5e-36  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  37.04 
 
 		 232 aa  151  5.9999999999999996e-36  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  38.03 
 
 		 214 aa  150  2e-35  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  36.62 
 
 		 224 aa  150  2e-35  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_003295  RSc2312  two-component response regulator transcription regulator protein  39.15 
 
 		 238 aa  149  3e-35  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.500036 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  38.39 
 
 		 213 aa  149  3e-35  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  36.15 
 
 		 224 aa  148  5e-35  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_008255  CHU_1317  response regulator  36.62 
 
 		 220 aa  148  6e-35  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_013037  Dfer_2055  two component transcriptional regulator, LuxR family  35.91 
 
 		 220 aa  148  7e-35  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  37.27 
 
 		 224 aa  148  8e-35  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009632  SaurJH1_2463  response regulator receiver  38.21 
 
 		 217 aa  147  8e-35  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009487  SaurJH9_2415  two component LuxR family transcriptional regulator  38.21 
 
 		 217 aa  147  8e-35  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET0663  LuxR family DNA-binding response regulator  36.15 
 
 		 224 aa  147  1.0000000000000001e-34  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET0697  LuxR family DNA-binding response regulator  36.15 
 
 		 224 aa  147  1.0000000000000001e-34  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  38.25 
 
 		 218 aa  147  1.0000000000000001e-34  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  34.74 
 
 		 216 aa  147  2.0000000000000003e-34  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_013501  Rmar_2437  two component transcriptional regulator, LuxR family  39.62 
 
 		 218 aa  147  2.0000000000000003e-34  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  37.74 
 
 		 219 aa  145  3e-34  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  36.32 
 
 		 216 aa  146  3e-34  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_1406  DNA-binding response regulator  36.79 
 
 		 215 aa  145  4.0000000000000006e-34  Colwellia psychrerythraea 34H  Bacteria  normal  0.253896  n/a   
 
 
-
 
NC_010718  Nther_0648  two component transcriptional regulator, LuxR family  38.68 
 
 		 215 aa  145  4.0000000000000006e-34  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  36.2 
 
 		 241 aa  145  4.0000000000000006e-34  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_009439  Pmen_2375  two component LuxR family transcriptional regulator  40.57 
 
 		 214 aa  145  5e-34  Pseudomonas mendocina ymp  Bacteria  normal  0.405291  normal  0.0506876 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  37.89 
 
 		 228 aa  145  6e-34  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  39.05 
 
 		 224 aa  145  7.0000000000000006e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_002939  GSU0254  LuxR family DNA-binding response regulator  39.17 
 
 		 215 aa  144  9e-34  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  35.71 
 
 		 213 aa  144  1e-33  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  40 
 
 		 209 aa  144  1e-33  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013235  Namu_5079  two component transcriptional regulator, LuxR family  35.05 
 
 		 217 aa  144  1e-33  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  0.525358 
 
 
-
 
NC_013595  Sros_6032  response regulator receiver protein  35.55 
 
 		 218 aa  144  1e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.53611  normal  1 
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  37.44 
 
 		 216 aa  143  2e-33  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  35.27 
 
 		 215 aa  143  2e-33  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_002976  SERP1981  transcriptional regulatory protein DegU, putative  36.62 
 
 		 218 aa  142  3e-33  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  39.17 
 
 		 224 aa  142  3e-33  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  39.17 
 
 		 225 aa  142  4e-33  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  37.38 
 
 		 224 aa  142  5e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal  1 
 
 
-
 
NC_009483  Gura_2782  two component LuxR family transcriptional regulator  38.21 
 
 		 214 aa  142  5e-33  Geobacter uraniireducens Rf4  Bacteria  normal  0.834695  n/a   
 
 
-
 
NC_009901  Spea_2299  two component LuxR family transcriptional regulator  34.29 
 
 		 221 aa  142  5e-33  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  37.56 
 
 		 213 aa  142  5e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_0154  two component transcriptional regulator, LuxR family  37.04 
 
 		 244 aa  141  6e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_008146  Mmcs_0590  two component LuxR family transcriptional regulator  35.81 
 
 		 215 aa  141  7e-33  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_0603  two component LuxR family transcriptional regulator  35.81 
 
 		 215 aa  141  7e-33  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009077  Mjls_0581  two component LuxR family transcriptional regulator  35.81 
 
 		 215 aa  141  7e-33  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002939  GSU3229  LuxR family DNA-binding response regulator  37.74 
 
 		 229 aa  141  8e-33  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_0700  two component transcriptional regulator, LuxR family  34.55 
 
 		 218 aa  141  8e-33  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00980919  normal  0.316207 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  36.92 
 
 		 217 aa  141  9e-33  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_1646  two component LuxR family transcriptional regulator  36.02 
 
 		 219 aa  141  9e-33  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.92254 
 
 
-
 
NC_009483  Gura_2780  two component LuxR family transcriptional regulator  36.62 
 
 		 226 aa  140  9.999999999999999e-33  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010501  PputW619_3375  two component LuxR family transcriptional regulator  39.15 
 
 		 212 aa  141  9.999999999999999e-33  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  40.48 
 
 		 218 aa  140  9.999999999999999e-33  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  40.48 
 
 		 218 aa  140  9.999999999999999e-33  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010338  Caul_2685  two component LuxR family transcriptional regulator  34.25 
 
 		 222 aa  140  1.9999999999999998e-32  Caulobacter sp. K31  Bacteria  normal  0.120511  normal  1 
 
 
-
 
NC_009675  Anae109_1385  two component LuxR family transcriptional regulator  35.85 
 
 		 212 aa  139  1.9999999999999998e-32  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  37.56 
 
 		 225 aa  140  1.9999999999999998e-32  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0919  two component LuxR family transcriptional regulator  35.38 
 
 		 214 aa  140  1.9999999999999998e-32  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008700  Sama_1873  response regulator receiver protein  36.36 
 
 		 215 aa  140  1.9999999999999998e-32  Shewanella amazonensis SB2B  Bacteria  normal  0.56104  normal  1 
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  38.39 
 
 		 236 aa  139  3e-32  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  39.63 
 
 		 218 aa  139  3e-32  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  38.39 
 
 		 222 aa  139  3e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  39.91 
 
 		 261 aa  139  3e-32  Cryptobacterium curtum DSM 15641  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012560  Avin_25030  Response regulator GacA  38.16 
 
 		 209 aa  139  3.9999999999999997e-32  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_007520  Tcr_1382  two component LuxR family transcriptional regulator  37.33 
 
 		 232 aa  139  3.9999999999999997e-32  Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  36.77 
 
 		 226 aa  139  3.9999999999999997e-32  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal  1 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  38.32 
 
 		 217 aa  139  3.9999999999999997e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003909  BCE_1102  LuxR family DNA-binding response regulator  34.91 
 
 		 214 aa  138  4.999999999999999e-32  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  34.74 
 
 		 216 aa  138  4.999999999999999e-32  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  37.44 
 
 		 219 aa  139  4.999999999999999e-32  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_009441  Fjoh_4628  two component LuxR family transcriptional regulator  35.05 
 
 		 219 aa  138  4.999999999999999e-32  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_4778  two component LuxR family transcriptional regulator  40.48 
 
 		 208 aa  138  6e-32  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00000269792  n/a   
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  34.27 
 
 		 216 aa  138  6e-32  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2087  two component LuxR family transcriptional regulator  36.28 
 
 		 213 aa  138  6e-32  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0358431  n/a   
 
 
-
 
NC_009656  PSPA7_2613  response regulator GacA  36.19 
 
 		 214 aa  138  6e-32  Pseudomonas aeruginosa PA7  Bacteria  normal  0.466832  n/a   
 
 
-
 
NC_008463  PA14_30650  response regulator GacA  36.19 
 
 		 214 aa  138  6e-32  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  hitchhiker  0.00700013 
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  40.48 
 
 		 218 aa  138  7e-32  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  38.16 
 
 		 218 aa  137  7.999999999999999e-32  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011772  BCG9842_B3078  DNA-binding response regulator, LuxR family  36.79 
 
 		 213 aa  137  1e-31  Bacillus cereus G9842  Bacteria  normal  1  hitchhiker  0.000000185138 
 
 
-
 
NC_010571  Oter_1239  two component LuxR family transcriptional regulator  40.43 
 
 		 196 aa  137  1e-31  Opitutus terrae PB90-1  Bacteria  normal  0.0482404  normal  0.916816 
 
 
-
 
NC_012669  Bcav_3541  two component transcriptional regulator, LuxR family  38.97 
 
 		 211 aa  137  1e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.485125  normal  0.513005 
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  39.52 
 
 		 218 aa  137  1e-31  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_3747  two component LuxR family transcriptional regulator  38.94 
 
 		 206 aa  137  1e-31  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  34.42 
 
 		 222 aa  137  1e-31  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.764026 
 
 
-
 
NC_009831  Ssed_0905  putative nitrate/nitrite DNA-binding response regulator  37.14 
 
 		 206 aa  136  2e-31  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0826046  hitchhiker  0.00000533581 
 
 
-
 
NC_011149  SeAg_B1780  EsrB  36.45 
 
 		 212 aa  136  2e-31  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.111024  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>