| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0105 |
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| Symbol | |
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| ID | 4185935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 127224 |
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| End bp | 127871 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638070107 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_676738 |
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| Protein GI | 110636531 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0303042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.309888 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAA AGATCTCTAT TATTATTGCT GATGATCATA CCCTGATCAG AGATGGTATT
AAATCGCTGT TGCAATCTGT TGATGAATTT GAAGTAGTTG GCGAAGCGAC CGATGGAGAT
GAGTTGATTC AATTCATTGA CACACTGGAT CCAGAAATCG TGGTTCTTGA TATTACGATG
CCCAAAAAGT CAGGTATAGA AGTAATTACT GAAGTAAAAA AATATAATAA TCGTGTGAAA
TTTATTGTGC TCTCCATGCA TGACAATCCT GAATACGTTT TAAAAAGTGT TCAATCGGGA
GCGCTATCTT ATTTATTAAA AAATACAGAT CATGAAGAAA TTATTAAAGC TGTTAAAGCT
GTAAGTGCTG GTCAGAAATA TTTTTCTCCC GATATCTACT CTATTATTTT GAACGGGCTT
GCAAACCCTG AGTTGGTAAA GGCGAGCCAA ATTGCAGAAA CATTGACAAA ACGTGAGCTC
GAAGTTTTGA AAGAGGTTTC TATGGGCTTA AGTACAAAAT TGATTGCTGA TAAACTATTT
ATAAGTGTTC GTACTGTTGA AACCCATCGC ATCAATCTTA TGAAAAAATT AGATGTTCAT
AATTCTGCAG AATTAATAAA AAAAGCAATG GATTTGAATA TTATTTAA
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| Protein sequence | MMKKISIIIA DDHTLIRDGI KSLLQSVDEF EVVGEATDGD ELIQFIDTLD PEIVVLDITM
PKKSGIEVIT EVKKYNNRVK FIVLSMHDNP EYVLKSVQSG ALSYLLKNTD HEEIIKAVKA
VSAGQKYFSP DIYSIILNGL ANPELVKASQ IAETLTKREL EVLKEVSMGL STKLIADKLF
ISVRTVETHR INLMKKLDVH NSAELIKKAM DLNII
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