Gene Avin_25030 details

Gene Information

• Locus tag: Avin_25030
• Symbol: gacA
• ID: 7764129
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 2505520
• End bp: 2506149
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643805386
• Product: Response regulator GacA
• Protein accession: YP_002799662
• Protein GI: 226944589
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGTCGATG ATCACGATCT GGTCCGCGCT GGCATCACCC GGATGCTGGC CGATATCGAC 
GGCCTGCAGG TCGTCGGACA AGGCAGCTCC GGCGAAGAGG CCCTGAAGAA GGCGCGCGAT 
CTCAAGCCCG ATGTGATCCT GATGGATGTC AAGATGCCCG GCATCGGCGG CCTCGAGGCG 
ACTCGCAAGC TGCAGCGCAG CAATCCCGAC ATCAAGGTGA TCGCGGTGAC GGTGTGCGAG 
GAGGACCCGT TCCCCACGCG TCTCATGCAG GCCGGGGCGG CTGGCTACCT GACCAAGGGC 
GCGGCTCTCG ACGAGATGGT CCAGGCCATT CGCCAAGTCT TCGCCGGGCA TCGCTATATC 
AGCCCGCAAA TCGCCCAGCA ACTGGCCCTG AAGGCCTTCC AGCCGCAGCA GAGCGGTTCT 
CCCTTCGATC TGCTCTCCGA GCGGGAGATC CAGATCGCCC TGATGATCGC CAATTGCGAG 
AAGGTGCAGA GCATTTCCGA CAAGCTCTGT CTCTCGCCGA AGACCGTGAA CACCTACCGC 
TACCGCATCT TCGAGAAACT TTCCATCAAC AGCGACGTGG AGCTGGCGCT ATTGGCCGTG 
CGACACGGCA TGGTCGACGC ATCCAGCTGA 

 

Protein sequence

MVDDHDLVRA GITRMLADID GLQVVGQGSS GEEALKKARD LKPDVILMDV KMPGIGGLEA 
TRKLQRSNPD IKVIAVTVCE EDPFPTRLMQ AGAAGYLTKG AALDEMVQAI RQVFAGHRYI 
SPQIAQQLAL KAFQPQQSGS PFDLLSEREI QIALMIANCE KVQSISDKLC LSPKTVNTYR 
YRIFEKLSIN SDVELALLAV RHGMVDASS