Gene Tcr_1382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1382 
Symbol 
ID3762018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1495619 
End bp1496317 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content42% 
IMG OID637786116 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_391651 
Protein GI78485726 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAGG CAAAACCTAA AGTTCTATTG GCTGAAGATC ACGACTTGGT TCGAGCTGGA 
TTTAAATCCA TTTTAGATTC GGATGGTACC GTTAAGGTCA TCGCTGAAGC ACAAGATGGC
GAAACCACCC TTTCATTAAT TGAAGAAAAA CAACCGGATA TTTTGATTAT TGATTTATCA
ATGCCTAAAT TGAGTGGGTT GGCGGTGATT ACACAGCTTA AAAAGCAAAA AAATCCAATC
AAGATCATTG TGTTAACGGC CGCAGAAGCA CCGAATGTCT GGAAGGAAGT GCTGGACTTA
GGTGTTGAAG GGTTAGCGCT TAAGTCGGTT TCTAAAGCGG AACTGGTTTC AGGGATTAAG
TCTGTGATTG CGGATGAGAA TTTCATTCAT TCTGAAATTC AACCGGCTCT GGATGCTTAT
CTAGCGGAAC TGGAAGGGCA GAAAACACCG GAAGAAGATT CGGGAGATAA ACCAAGCCGA
CCTAAGAAAC TTTCCGTACG TGAAAAGCAA GTGATTAAGT TGGTTGCAGA AGGGTATAAA
ACCAAAGACA TTGCGGATAT GTTAGAAATC AGCGATCGTA CGGTCTCTAA GCACAGAGAA
AATATTATGA CTAAACTGGG CATGACCGCA TCGGCCGAAT TGGTGAATTA CGCAAGCCAT
ATTGGGTTGC TTAAAGTAGC CTTGGATGAA ATTCGTTAA
 
Protein sequence
MAKAKPKVLL AEDHDLVRAG FKSILDSDGT VKVIAEAQDG ETTLSLIEEK QPDILIIDLS 
MPKLSGLAVI TQLKKQKNPI KIIVLTAAEA PNVWKEVLDL GVEGLALKSV SKAELVSGIK
SVIADENFIH SEIQPALDAY LAELEGQKTP EEDSGDKPSR PKKLSVREKQ VIKLVAEGYK
TKDIADMLEI SDRTVSKHRE NIMTKLGMTA SAELVNYASH IGLLKVALDE IR